Back to the "Multiple platform build/check report" A  B [C] D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.4: INSTALL report for CNTools on moscato1

This page was generated on 2016-09-21 03:42:47 -0700 (Wed, 21 Sep 2016).

Package 227/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CNTools 1.29.0
J. Zhang
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CNTools
Last Changed Rev: 117081 / Revision: 121152
Last Changed Date: 2016-05-03 14:30:44 -0700 (Tue, 03 May 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: CNTools
Version: 1.29.0
Command: rm -rf CNTools.buildbin-libdir && mkdir CNTools.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/CNTools_1.29.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=CNTools.buildbin-libdir --merge-multiarch CNTools_1.29.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL CNTools_1.29.0.zip && rm CNTools_1.29.0.tar.gz CNTools_1.29.0.zip
StartedAt: 2016-09-19 20:36:46 -0700 (Mon, 19 Sep 2016)
EndedAt: 2016-09-19 20:37:10 -0700 (Mon, 19 Sep 2016)
EllapsedTime: 24.8 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf CNTools.buildbin-libdir && mkdir CNTools.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/CNTools_1.29.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=CNTools.buildbin-libdir --merge-multiarch CNTools_1.29.0.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL CNTools_1.29.0.zip  && rm CNTools_1.29.0.tar.gz CNTools_1.29.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  776k  100  776k    0     0  38.3M      0 --:--:-- --:--:-- --:--:-- 50.5M

install for i386

* installing *source* package 'CNTools' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG     -I"c:/local323/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c getratios.c -o getratios.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o CNTools.dll tmp.def getratios.o -Lc:/local323/lib/i386 -Lc:/local323/lib -LD:/biocbld/BBS-3˜1.4-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-3.4-bioc/meat/CNTools.buildbin-libdir/CNTools/libs/i386
** R
** data
** preparing package for lazy loading
Creating a new generic function for 'start' in package 'CNTools'
Creating a new generic function for 'end' in package 'CNTools'
Creating a generic function for 'genefilter' from package 'genefilter' in package 'CNTools'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'CNTools' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"D:/biocbld/BBS-3˜1.4-B/R/include" -DNDEBUG     -I"c:/local323/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c getratios.c -o getratios.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o CNTools.dll tmp.def getratios.o -Lc:/local323/lib/x64 -Lc:/local323/lib -LD:/biocbld/BBS-3˜1.4-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-3.4-bioc/meat/CNTools.buildbin-libdir/CNTools/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CNTools' as CNTools_1.29.0.zip
* DONE (CNTools)
* installing to library 'D:/biocbld/bbs-3.4-bioc/R/library'
package 'CNTools' successfully unpacked and MD5 sums checked