ggtree 1.6.11
Guangchuang Yu
| Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/ggtree | | Last Changed Rev: 127338 / Revision: 128728 | | Last Changed Date: 2017-03-13 04:37:44 -0400 (Mon, 13 Mar 2017) |
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | |  |
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |
| morelia | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | OK | OK | |
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### Running command:
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### cd ggtree.buildbin-libdir/ggtree && zip -r ../../ggtree_1.6.11.zip . & cd ../..
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adding: as.phylo.igraph.R (284 bytes security) (deflated 11%)
adding: CITATION (284 bytes security) (deflated 56%)
adding: DESCRIPTION (284 bytes security) (deflated 45%)
adding: doc/ (324 bytes security) (stored 0%)
adding: doc/advanceTreeAnnotation.html (284 bytes security) (deflated 49%)
adding: doc/advanceTreeAnnotation.R (284 bytes security) (deflated 64%)
adding: doc/advanceTreeAnnotation.Rmd (284 bytes security) (deflated 58%)
adding: doc/ggtree.html (284 bytes security) (deflated 68%)
adding: doc/ggtree.R (284 bytes security) (deflated 56%)
adding: doc/ggtree.Rmd (284 bytes security) (deflated 58%)
adding: doc/ggtreeUtilities.html (284 bytes security) (deflated 60%)
adding: doc/ggtreeUtilities.R (284 bytes security) (deflated 55%)
adding: doc/ggtreeUtilities.Rmd (284 bytes security) (deflated 48%)
adding: doc/index.html (284 bytes security) (deflated 82%)
adding: doc/treeAnnotation.html (284 bytes security) (deflated 52%)
adding: doc/treeAnnotation.R (284 bytes security) (deflated 74%)
adding: doc/treeAnnotation.Rmd (284 bytes security) (deflated 64%)
adding: doc/treeImport.html (284 bytes security) (deflated 49%)
adding: doc/treeImport.R (284 bytes security) (deflated 76%)
adding: doc/treeImport.Rmd (284 bytes security) (deflated 68%)
adding: doc/treeManipulation.html (284 bytes security) (deflated 37%)
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adding: doc/treeManipulation.Rmd (284 bytes security) (deflated 65%)
adding: doc/treeVisualization.html (284 bytes security) (deflated 52%)
adding: doc/treeVisualization.R (284 bytes security) (deflated 78%)
adding: doc/treeVisualization.Rmd (284 bytes security) (deflated 65%)
adding: examples/ (324 bytes security) (stored 0%)
adding: examples/FluA_H3_AA.fas (284 bytes security) (deflated 94%)
adding: examples/Genotype.txt (284 bytes security) (deflated 85%)
adding: examples/MCC_FluA_H3.tree (284 bytes security) (deflated 67%)
adding: examples/mlc (284 bytes security) (deflated 91%)
adding: examples/NAG_inHA1.txt (284 bytes security) (deflated 63%)
adding: examples/rst (284 bytes security) (deflated 97%)
adding: examples/sites.txt (284 bytes security) (deflated 54%)
adding: extdata/ (324 bytes security) (stored 0%)
adding: extdata/ADH.nhx (284 bytes security) (deflated 49%)
adding: extdata/BEAST/ (324 bytes security) (stored 0%)
adding: extdata/BEAST/beast_mcc.tree (284 bytes security) (deflated 66%)
adding: extdata/HYPHY/ (324 bytes security) (stored 0%)
adding: extdata/HYPHY/ancseq.nex (284 bytes security) (deflated 93%)
adding: extdata/HYPHY/labelledtree.tree (284 bytes security) (deflated 50%)
adding: extdata/pa.fas (284 bytes security) (deflated 93%)
adding: extdata/pa.nwk (284 bytes security) (deflated 45%)
adding: extdata/PAML_Baseml/ (324 bytes security) (stored 0%)
adding: extdata/PAML_Baseml/mlb (284 bytes security) (deflated 86%)
adding: extdata/PAML_Baseml/rst (284 bytes security) (deflated 93%)
adding: extdata/PAML_Codeml/ (324 bytes security) (stored 0%)
adding: extdata/PAML_Codeml/mlc (284 bytes security) (deflated 86%)
adding: extdata/PAML_Codeml/rst (284 bytes security) (deflated 93%)
adding: extdata/pa_subs.csv (284 bytes security) (deflated 44%)
adding: extdata/r8s/ (324 bytes security) (stored 0%)
adding: extdata/r8s/H3.r8s (284 bytes security) (deflated 73%)
adding: extdata/r8s/H3.tree (284 bytes security) (deflated 63%)
adding: extdata/r8s/H3_r8s_output.log (284 bytes security) (deflated 85%)
adding: extdata/RAxML/ (324 bytes security) (stored 0%)
adding: extdata/RAxML/Dated_FluA_H3.fas (284 bytes security) (deflated 95%)
adding: extdata/RAxML/RAxML_bestTree.H3 (284 bytes security) (deflated 58%)
adding: extdata/RAxML/RAxML_bipartitions.H3 (284 bytes security) (deflated 58%)
adding: extdata/RAxML/RAxML_bipartitionsBranchLabels.H3 (284 bytes security) (deflated 58%)
adding: extdata/RAxML/RAxML_bootstrap.H3 (284 bytes security) (deflated 96%)
adding: extdata/RAxML/RAxML_info.H3 (284 bytes security) (deflated 77%)
adding: extdata/sample.jplace (284 bytes security) (deflated 47%)
adding: extdata/sample.nwk (284 bytes security) (deflated 25%)
adding: extdata/sample.phy (284 bytes security) (deflated 89%)
adding: extdata/twoD.tree (284 bytes security) (deflated 75%)
adding: help/ (324 bytes security) (stored 0%)
adding: help/aliases.rds (284 bytes security) (stored 0%)
adding: help/AnIndex (284 bytes security) (deflated 80%)
adding: help/ggtree.rdb (284 bytes security) (deflated 3%)
adding: help/ggtree.rdx (284 bytes security) (deflated 2%)
adding: help/paths.rds (284 bytes security) (stored 0%)
adding: html/ (324 bytes security) (stored 0%)
adding: html/00Index.html (284 bytes security) (deflated 85%)
adding: html/R.css (284 bytes security) (deflated 75%)
adding: INDEX (284 bytes security) (deflated 75%)
adding: MD5 (284 bytes security) (deflated 48%)
adding: Meta/ (324 bytes security) (stored 0%)
adding: Meta/hsearch.rds (284 bytes security) (deflated 1%)
adding: Meta/links.rds (284 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (284 bytes security) (stored 0%)
adding: Meta/package.rds (284 bytes security) (stored 0%)
adding: Meta/Rd.rds (284 bytes security) (stored 0%)
adding: Meta/vignette.rds (284 bytes security) (stored 0%)
adding: NAMESPACE (284 bytes security) (deflated 75%)
adding: NEWS (284 bytes security) (deflated 72%)
adding: R/ (324 bytes security) (stored 0%)
adding: R/ggtree (284 bytes security) (deflated 41%)
adding: R/ggtree.rdb (284 bytes security) (deflated 13%)
adding: R/ggtree.rdx (284 bytes security) (deflated 0%)