diffHic 1.6.0
Aaron Lun
| Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/diffHic | | Last Changed Rev: 122710 / Revision: 128728 | | Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016) |
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | |  |
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | [ OK ] | |
| morelia | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | OK | |
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### Running command:
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### cd diffHic.buildbin-libdir/diffHic && zip -r ../../diffHic_1.6.0.zip . & cd ../..
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adding: CITATION (284 bytes security) (deflated 41%)
adding: DESCRIPTION (284 bytes security) (deflated 42%)
adding: doc/ (324 bytes security) (stored 0%)
adding: doc/bam2hdf.R (284 bytes security) (deflated 65%)
adding: doc/diffHic.pdf (284 bytes security) (deflated 6%)
adding: doc/diffHic.Rnw (284 bytes security) (deflated 50%)
adding: doc/diffHicUsersGuide.pdf (284 bytes security) (deflated 8%)
adding: doc/index.html (284 bytes security) (deflated 63%)
adding: doc/sra2bam.sh (284 bytes security) (deflated 58%)
adding: exdata/ (324 bytes security) (stored 0%)
adding: exdata/cuts.rds (284 bytes security) (stored 0%)
adding: exdata/generator.R (284 bytes security) (deflated 80%)
adding: exdata/hic_sort.bam (284 bytes security) (stored 0%)
adding: help/ (324 bytes security) (stored 0%)
adding: help/aliases.rds (284 bytes security) (stored 0%)
adding: help/AnIndex (284 bytes security) (deflated 64%)
adding: help/diffHic.rdb (284 bytes security) (deflated 0%)
adding: help/diffHic.rdx (284 bytes security) (stored 0%)
adding: help/paths.rds (284 bytes security) (stored 0%)
adding: html/ (324 bytes security) (stored 0%)
adding: html/00Index.html (284 bytes security) (deflated 78%)
adding: html/R.css (284 bytes security) (deflated 75%)
adding: INDEX (284 bytes security) (deflated 64%)
adding: libs/ (324 bytes security) (stored 0%)
adding: libs/i386/ (324 bytes security) (stored 0%)
adding: libs/i386/diffHic.dll (284 bytes security) (deflated 60%)
adding: libs/x64/ (324 bytes security) (stored 0%)
adding: libs/x64/diffHic.dll (284 bytes security) (deflated 65%)
adding: MD5 (284 bytes security) (deflated 49%)
adding: Meta/ (324 bytes security) (stored 0%)
adding: Meta/hsearch.rds (284 bytes security) (stored 0%)
adding: Meta/links.rds (284 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (284 bytes security) (stored 0%)
adding: Meta/package.rds (284 bytes security) (stored 0%)
adding: Meta/Rd.rds (284 bytes security) (stored 0%)
adding: Meta/vignette.rds (284 bytes security) (stored 0%)
adding: NAMESPACE (284 bytes security) (deflated 46%)
adding: NEWS.Rd (284 bytes security) (deflated 58%)
adding: python/ (324 bytes security) (stored 0%)
adding: python/iter_map.py (284 bytes security) (deflated 62%)
adding: python/presplit_map.py (284 bytes security) (deflated 63%)
adding: R/ (324 bytes security) (stored 0%)
adding: R/diffHic (284 bytes security) (deflated 41%)
adding: R/diffHic.rdb (284 bytes security) (deflated 18%)
adding: R/diffHic.rdx (284 bytes security) (stored 0%)
adding: tests/ (324 bytes security) (stored 0%)
adding: tests/run_all_tests.sh (284 bytes security) (deflated 25%)
adding: tests/simcounts.R (284 bytes security) (deflated 63%)
adding: tests/simsam.R (284 bytes security) (deflated 59%)
adding: tests/test-anno.R (284 bytes security) (deflated 74%)
adding: tests/test-anno.Rout.save (284 bytes security) (deflated 74%)
adding: tests/test-box.R (284 bytes security) (deflated 67%)
adding: tests/test-box.Rout.save (284 bytes security) (deflated 62%)
adding: tests/test-cluster.R (284 bytes security) (deflated 78%)
adding: tests/test-cluster.Rout.save (284 bytes security) (deflated 79%)
adding: tests/test-connect.R (284 bytes security) (deflated 78%)
adding: tests/test-connect.Rout.save (284 bytes security) (deflated 80%)
adding: tests/test-cut.R (284 bytes security) (deflated 60%)
adding: tests/test-cut.Rout.save (284 bytes security) (deflated 69%)
adding: tests/test-diclust.R (284 bytes security) (deflated 71%)
adding: tests/test-diclust.Rout.save (284 bytes security) (deflated 68%)
adding: tests/test-domains.R (284 bytes security) (deflated 77%)
adding: tests/test-domains.Rout.save (284 bytes security) (deflated 73%)
adding: tests/test-empty.R (284 bytes security) (deflated 51%)
adding: tests/test-empty.Rout.save (284 bytes security) (deflated 59%)
adding: tests/test-filter.R (284 bytes security) (deflated 73%)
adding: tests/test-filter.Rout.save (284 bytes security) (deflated 74%)
adding: tests/test-hic-pair.R (284 bytes security) (deflated 73%)
adding: tests/test-hic-pair.Rout.save (284 bytes security) (deflated 79%)
adding: tests/test-interactions.R (284 bytes security) (deflated 79%)
adding: tests/test-interactions.Rout.save (284 bytes security) (deflated 78%)
adding: tests/test-itercor.R (284 bytes security) (deflated 65%)
adding: tests/test-itercor.Rout.save (284 bytes security) (deflated 59%)
adding: tests/test-margin.R (284 bytes security) (deflated 77%)
adding: tests/test-margin.Rout.save (284 bytes security) (deflated 74%)
adding: tests/test-neighbor.R (284 bytes security) (deflated 70%)
adding: tests/test-neighbor.Rout.save (284 bytes security) (deflated 65%)
adding: tests/test-pair-manip.R (284 bytes security) (deflated 67%)
adding: tests/test-pair-manip.Rout.save (284 bytes security) (deflated 72%)