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BioC 3.4: INSTALL report for SamSPECTRAL on zin1

This page was generated on 2016-09-21 03:36:55 -0700 (Wed, 21 Sep 2016).

Package 1076/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SamSPECTRAL 1.27.2
Habil Zare
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/SamSPECTRAL
Last Changed Rev: 117086 / Revision: 121152
Last Changed Date: 2016-05-03 15:52:03 -0700 (Tue, 03 May 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SamSPECTRAL
Version: 1.27.2
Command: /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD INSTALL SamSPECTRAL
StartedAt: 2016-09-19 20:01:22 -0700 (Mon, 19 Sep 2016)
EndedAt: 2016-09-19 20:01:23 -0700 (Mon, 19 Sep 2016)
EllapsedTime: 1.0 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD INSTALL SamSPECTRAL
###
##############################################################################
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* installing to library ‘/home/biocbuild/bbs-3.4-bioc/R/library’
* installing *source* package ‘SamSPECTRAL’ ...
** libs
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -Wall -c Rinit.c -o Rinit.o
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -Wall -c conductance_computation.c -o conductance_computation.o
conductance_computation.c: In function ‘conductance_computation’:
conductance_computation.c:155:17: warning: variable ‘repres_ind’ set but not used [-Wunused-but-set-variable]
  int *density, *repres_ind;
                 ^
conductance_computation.c:155:7: warning: variable ‘density’ set but not used [-Wunused-but-set-variable]
  int *density, *repres_ind;
       ^
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -Wall -c maximum_of_rows.c -o maximum_of_rows.o
gcc -shared -L/home/biocbuild/bbs-3.4-bioc/R/lib -L/usr/local/lib -o SamSPECTRAL.so Rinit.o conductance_computation.o maximum_of_rows.o -L/home/biocbuild/bbs-3.4-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.4-bioc/R/library/SamSPECTRAL/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (SamSPECTRAL)