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BioC 3.4: INSTALL report for MSGFplus on moscato1

This page was generated on 2016-09-21 03:46:20 -0700 (Wed, 21 Sep 2016).

Package 783/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSGFplus 1.7.2
Thomas Lin Pedersen
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/MSGFplus
Last Changed Rev: 117512 / Revision: 121152
Last Changed Date: 2016-05-15 13:14:22 -0700 (Sun, 15 May 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: MSGFplus
Version: 1.7.2
Command: rm -rf MSGFplus.buildbin-libdir && mkdir MSGFplus.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/MSGFplus_1.7.2.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=MSGFplus.buildbin-libdir --merge-multiarch MSGFplus_1.7.2.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL MSGFplus_1.7.2.zip && rm MSGFplus_1.7.2.tar.gz MSGFplus_1.7.2.zip
StartedAt: 2016-09-19 20:24:00 -0700 (Mon, 19 Sep 2016)
EndedAt: 2016-09-19 20:24:14 -0700 (Mon, 19 Sep 2016)
EllapsedTime: 14.2 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf MSGFplus.buildbin-libdir && mkdir MSGFplus.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.4/bioc/src/contrib/MSGFplus_1.7.2.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=MSGFplus.buildbin-libdir --merge-multiarch MSGFplus_1.7.2.tar.gz && D:\biocbld\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL MSGFplus_1.7.2.zip  && rm MSGFplus_1.7.2.tar.gz MSGFplus_1.7.2.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 47831  100 47831    0     0   9.9M      0 --:--:-- --:--:-- --:--:-- 45.6M

install for i386

* installing *source* package 'MSGFplus' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'MSGFplus' ...
** testing if installed package can be loaded
Warning in fun(libname, pkgname) :
  Java need to be at least version 1.7 for MS-GF+ to work. Please upgrade.
* MD5 sums
packaged installation of 'MSGFplus' as MSGFplus_1.7.2.zip
* DONE (MSGFplus)
* installing to library 'D:/biocbld/bbs-3.4-bioc/R/library'
package 'MSGFplus' successfully unpacked and MD5 sums checked