Back to the "Multiple platform build/check report" A  B [C] D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.4: CHECK report for ChIPpeakAnno on zin1

This page was generated on 2016-09-16 03:36:31 -0700 (Fri, 16 Sep 2016).

Package 186/1257HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPpeakAnno 3.7.7
Lihua Julie Zhu , Jianhong Ou
Snapshot Date: 2016-09-14 19:15:30 -0700 (Wed, 14 Sep 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ChIPpeakAnno
Last Changed Rev: 120549 / Revision: 120967
Last Changed Date: 2016-08-29 09:09:10 -0700 (Mon, 29 Aug 2016)
zin1 Linux (Ubuntu 16.04 LTS) / x86_64  OK  OK [ ERROR ]
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  OK  OK  ERROR  OK 
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  ERROR  OK 

Summary

Package: ChIPpeakAnno
Version: 3.7.7
Command: /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD check --no-vignettes --timings ChIPpeakAnno_3.7.7.tar.gz
StartedAt: 2016-09-15 04:07:34 -0700 (Thu, 15 Sep 2016)
EndedAt: 2016-09-15 04:07:38 -0700 (Thu, 15 Sep 2016)
EllapsedTime: 4.0 seconds
RetCode: 1
Status:  ERROR 
CheckDir: ChIPpeakAnno.Rcheck
Warnings: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD check --no-vignettes --timings ChIPpeakAnno_3.7.7.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.4-bioc/meat/ChIPpeakAnno.Rcheck’
* using R version 3.3.1 (2016-06-21)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘ChIPpeakAnno/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘ChIPpeakAnno’ version ‘3.7.7’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘MMDiffBamSubset’

Depends: includes the non-default packages:
  ‘grid’ ‘IRanges’ ‘Biostrings’ ‘GenomicRanges’ ‘S4Vectors’
  ‘VennDiagram’
Adding so many packages to the search path is excessive and importing
selectively is preferable.

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/home/biocbuild/bbs-3.4-bioc/meat/ChIPpeakAnno.Rcheck/00check.log’
for details.