methylKit 0.99.2 Altuna Akalin
Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016) | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/methylKit | Last Changed Rev: 119260 / Revision: 121152 | Last Changed Date: 2016-07-10 14:20:46 -0700 (Sun, 10 Jul 2016) |
| zin1 | Linux (Ubuntu 16.04 LTS) / x86_64 | NotNeeded | OK | WARNINGS | | |
moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | NotNeeded | OK | WARNINGS | [ OK ] | |
morelia | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | WARNINGS | OK | |
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### Running command:
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### cd methylKit.buildbin-libdir/methylKit && zip -r ../../methylKit_0.99.2.zip . & cd ../..
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adding: CITATION (188 bytes security) (deflated 51%)
adding: data/ (208 bytes security) (stored 0%)
adding: data/methylKit.RData (188 bytes security) (deflated 1%)
adding: DESCRIPTION (188 bytes security) (deflated 49%)
adding: doc/ (208 bytes security) (stored 0%)
adding: doc/index.html (188 bytes security) (deflated 59%)
adding: doc/methylKit.html (188 bytes security) (deflated 62%)
adding: doc/methylKit.R (188 bytes security) (deflated 76%)
adding: doc/methylKit.Rmd (188 bytes security) (deflated 67%)
adding: extdata/ (208 bytes security) (stored 0%)
adding: extdata/control1.myCpG.txt (188 bytes security) (deflated 80%)
adding: extdata/control2.myCpG.txt (188 bytes security) (deflated 80%)
adding: extdata/cpgi.hg18.bed.txt (188 bytes security) (deflated 67%)
adding: extdata/ctrl1.txt.bgz (188 bytes security) (deflated 1%)
adding: extdata/ctrl2.txt.bgz (188 bytes security) (deflated 1%)
adding: extdata/generic1.CpG.txt (188 bytes security) (deflated 40%)
adding: extdata/refseq.hg18.bed.txt (188 bytes security) (deflated 68%)
adding: extdata/test.fastq_bismark.sorted.min.sam (188 bytes security) (deflated 79%)
adding: extdata/test.fastq_bismark.unsorted.min.sam (188 bytes security) (deflated 80%)
adding: extdata/test1.myCpG.txt (188 bytes security) (deflated 78%)
adding: extdata/test1.txt.bgz (188 bytes security) (deflated 0%)
adding: extdata/test1.txt.bgz.tbi (188 bytes security) (stored 0%)
adding: extdata/test1_test2_ctrl1_ctrl2.txt.bgz (188 bytes security) (stored 0%)
adding: extdata/test1_test2_ctrl1_ctrl2_diffMeth.txt.bgz (188 bytes security) (deflated 0%)
adding: extdata/test2.myCpG.txt (188 bytes security) (deflated 78%)
adding: extdata/test2.txt.bgz (188 bytes security) (deflated 1%)
adding: help/ (208 bytes security) (stored 0%)
adding: help/aliases.rds (188 bytes security) (stored 0%)
adding: help/AnIndex (188 bytes security) (deflated 89%)
adding: help/methylKit.rdb (188 bytes security) (deflated 1%)
adding: help/methylKit.rdx (188 bytes security) (stored 0%)
adding: help/paths.rds (188 bytes security) (stored 0%)
adding: html/ (208 bytes security) (stored 0%)
adding: html/00Index.html (188 bytes security) (deflated 87%)
adding: html/R.css (188 bytes security) (deflated 75%)
adding: INDEX (188 bytes security) (deflated 73%)
adding: libs/ (208 bytes security) (stored 0%)
adding: libs/i386/ (208 bytes security) (stored 0%)
adding: libs/i386/methylKit.dll (188 bytes security) (deflated 61%)
adding: libs/x64/ (208 bytes security) (stored 0%)
adding: libs/x64/methylKit.dll (188 bytes security) (deflated 66%)
adding: MD5 (188 bytes security) (deflated 47%)
adding: Meta/ (208 bytes security) (stored 0%)
adding: Meta/data.rds (188 bytes security) (stored 0%)
adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
adding: Meta/links.rds (188 bytes security) (stored 0%)
adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
adding: Meta/package.rds (188 bytes security) (stored 0%)
adding: Meta/Rd.rds (188 bytes security) (stored 0%)
adding: Meta/vignette.rds (188 bytes security) (stored 0%)
adding: NAMESPACE (188 bytes security) (deflated 75%)
adding: NEWS (188 bytes security) (deflated 65%)
adding: R/ (208 bytes security) (stored 0%)
adding: R/methylKit (188 bytes security) (deflated 41%)
adding: R/methylKit.rdb (188 bytes security) (deflated 34%)
adding: R/methylKit.rdx (188 bytes security) (deflated 3%)
adding: scripts/ (208 bytes security) (stored 0%)
adding: scripts/create.data.R (188 bytes security) (deflated 69%)