affy 1.51.1
Rafael A. Irizarry
| Snapshot Date: 2016-09-19 19:15:14 -0700 (Mon, 19 Sep 2016) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/affy | | Last Changed Rev: 120595 / Revision: 121152 | | Last Changed Date: 2016-08-30 14:18:04 -0700 (Tue, 30 Aug 2016) |
| zin1 | Linux (Ubuntu 16.04 LTS) / x86_64 | [ OK ] | OK | WARNINGS | |  |
| moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | OK | OK | WARNINGS | OK | |
| morelia | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | WARNINGS | OK | |
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### Running command:
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### /home/biocbuild/bbs-3.4-bioc/R/bin/R CMD INSTALL affy
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* installing to library ‘/home/biocbuild/bbs-3.4-bioc/R/library’
* installing *source* package ‘affy’ ...
creating cache ./config.cache
checking how to run the C preprocessor... cc -E
checking for main in -lz... yes
checking for zlib.h... yes
checking if zlib version >= 1.1.3... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG -DHAVE_ZLIB=1 -I/usr/local/include -I"/home/biocbuild/bbs-3.4-bioc/R/library/preprocessCore/include" -fpic -g -O2 -Wall -c chipbackground.c -o chipbackground.o
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG -DHAVE_ZLIB=1 -I/usr/local/include -I"/home/biocbuild/bbs-3.4-bioc/R/library/preprocessCore/include" -fpic -g -O2 -Wall -c getall_locations.c -o getall_locations.o
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG -DHAVE_ZLIB=1 -I/usr/local/include -I"/home/biocbuild/bbs-3.4-bioc/R/library/preprocessCore/include" -fpic -g -O2 -Wall -c mas5calls.c -o mas5calls.o
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG -DHAVE_ZLIB=1 -I/usr/local/include -I"/home/biocbuild/bbs-3.4-bioc/R/library/preprocessCore/include" -fpic -g -O2 -Wall -c rma2.c -o rma2.o
gcc -I/home/biocbuild/bbs-3.4-bioc/R/include -DNDEBUG -DHAVE_ZLIB=1 -I/usr/local/include -I"/home/biocbuild/bbs-3.4-bioc/R/library/preprocessCore/include" -fpic -g -O2 -Wall -c rma_common.c -o rma_common.o
gcc -shared -L/home/biocbuild/bbs-3.4-bioc/R/lib -L/usr/local/lib -o affy.so chipbackground.o getall_locations.o mas5calls.o rma2.o rma_common.o -lz -L/home/biocbuild/bbs-3.4-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.4-bioc/R/library/affy/libs
** R
** data
** demo
** inst
** preparing package for lazy loading
Creating a generic function for ‘open’ from package ‘base’ in package ‘affy’
Creating a generic function for ‘close’ from package ‘base’ in package ‘affy’
Creating a generic function for ‘barplot’ from package ‘graphics’ in package ‘affy’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (affy)