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### Running command:
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### C:\cygwin64\bin\curl.exe -O http://linux2.bioconductor.org/BBS/3.3/bioc/src/contrib/gdsfmt_1.7.0.tar.gz && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch gdsfmt_1.7.0.tar.gz && rm gdsfmt_1.7.0.tar.gz
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
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install for i386
* installing to library 'c:/biocbld/bbs-3.3-bioc/R/library'
* installing *source* package 'gdsfmt' ...
** libs
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c R_CoreArray.cpp -o R_CoreArray.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c gdsfmt.cpp -o gdsfmt.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/CoreArray.cpp -o CoreArray/CoreArray.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dAllocator.cpp -o CoreArray/dAllocator.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dAny.cpp -o CoreArray/dAny.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dBase.cpp -o CoreArray/dBase.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dBitGDS.cpp -o CoreArray/dBitGDS.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dEndian.cpp -o CoreArray/dEndian.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dFile.cpp -o CoreArray/dFile.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dParallel.cpp -o CoreArray/dParallel.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c CoreArray/dParallel_Ext.c -o CoreArray/dParallel_Ext.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dPlatform.cpp -o CoreArray/dPlatform.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dSerial.cpp -o CoreArray/dSerial.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dStream.cpp -o CoreArray/dStream.o
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dStruct.cpp -o CoreArray/dStruct.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ZLIB/adler32.c -o ZLIB/adler32.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ZLIB/compress.c -o ZLIB/compress.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ZLIB/crc32.c -o ZLIB/crc32.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ZLIB/deflate.c -o ZLIB/deflate.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ZLIB/infback.c -o ZLIB/infback.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ZLIB/inffast.c -o ZLIB/inffast.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ZLIB/inflate.c -o ZLIB/inflate.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ZLIB/inftrees.c -o ZLIB/inftrees.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ZLIB/trees.c -o ZLIB/trees.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ZLIB/uncompr.c -o ZLIB/uncompr.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c ZLIB/zutil.c -o ZLIB/zutil.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c LZ4/lz4.c -o LZ4/lz4.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c LZ4/lz4hc.c -o LZ4/lz4hc.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c LZ4/lz4frame.c -o LZ4/lz4frame.o
gcc -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O3 -Wall -std=gnu99 -mtune=core2 -c LZ4/xxhash.c -o LZ4/xxhash.o
g++ -m32 -shared -s -static-libgcc -o gdsfmt.dll tmp.def R_CoreArray.o gdsfmt.o CoreArray/CoreArray.o CoreArray/dAllocator.o CoreArray/dAny.o CoreArray/dBase.o CoreArray/dBitGDS.o CoreArray/dEndian.o CoreArray/dFile.o CoreArray/dParallel.o CoreArray/dParallel_Ext.o CoreArray/dPlatform.o CoreArray/dSerial.o CoreArray/dStream.o CoreArray/dStruct.o ZLIB/adler32.o ZLIB/compress.o ZLIB/crc32.o ZLIB/deflate.o ZLIB/infback.o ZLIB/inffast.o ZLIB/inflate.o ZLIB/inftrees.o ZLIB/trees.o ZLIB/uncompr.o ZLIB/zutil.o LZ4/lz4.o LZ4/lz4hc.o LZ4/lz4frame.o LZ4/xxhash.o -Ld:/RCompile/r-compiling/local/local320/lib/i386 -Ld:/RCompile/r-compiling/local/local320/lib -Lc:/biocbld/BBS-3˜1.3-B/R/bin/i386 -lR
installing to c:/biocbld/bbs-3.3-bioc/R/library/gdsfmt/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing to library 'c:/biocbld/bbs-3.3-bioc/R/library'
* installing *source* package 'gdsfmt' ...
** libs
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c R_CoreArray.cpp -o R_CoreArray.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c gdsfmt.cpp -o gdsfmt.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/CoreArray.cpp -o CoreArray/CoreArray.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dAllocator.cpp -o CoreArray/dAllocator.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dAny.cpp -o CoreArray/dAny.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dBase.cpp -o CoreArray/dBase.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dBitGDS.cpp -o CoreArray/dBitGDS.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dEndian.cpp -o CoreArray/dEndian.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dFile.cpp -o CoreArray/dFile.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dParallel.cpp -o CoreArray/dParallel.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c CoreArray/dParallel_Ext.c -o CoreArray/dParallel_Ext.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dPlatform.cpp -o CoreArray/dPlatform.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dSerial.cpp -o CoreArray/dSerial.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dStream.cpp -o CoreArray/dStream.o
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -mtune=core2 -c CoreArray/dStruct.cpp -o CoreArray/dStruct.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ZLIB/adler32.c -o ZLIB/adler32.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ZLIB/compress.c -o ZLIB/compress.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ZLIB/crc32.c -o ZLIB/crc32.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ZLIB/deflate.c -o ZLIB/deflate.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ZLIB/infback.c -o ZLIB/infback.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ZLIB/inffast.c -o ZLIB/inffast.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ZLIB/inflate.c -o ZLIB/inflate.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ZLIB/inftrees.c -o ZLIB/inftrees.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ZLIB/trees.c -o ZLIB/trees.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ZLIB/uncompr.c -o ZLIB/uncompr.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ZLIB/zutil.c -o ZLIB/zutil.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c LZ4/lz4.c -o LZ4/lz4.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c LZ4/lz4hc.c -o LZ4/lz4hc.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c LZ4/lz4frame.c -o LZ4/lz4frame.o
gcc -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG -DUSING_R -I../inst/include -ICoreArray -I"d:/RCompile/r-compiling/local/local320/include" -O2 -Wall -std=gnu99 -mtune=core2 -c LZ4/xxhash.c -o LZ4/xxhash.o
g++ -m64 -shared -s -static-libgcc -o gdsfmt.dll tmp.def R_CoreArray.o gdsfmt.o CoreArray/CoreArray.o CoreArray/dAllocator.o CoreArray/dAny.o CoreArray/dBase.o CoreArray/dBitGDS.o CoreArray/dEndian.o CoreArray/dFile.o CoreArray/dParallel.o CoreArray/dParallel_Ext.o CoreArray/dPlatform.o CoreArray/dSerial.o CoreArray/dStream.o CoreArray/dStruct.o ZLIB/adler32.o ZLIB/compress.o ZLIB/crc32.o ZLIB/deflate.o ZLIB/infback.o ZLIB/inffast.o ZLIB/inflate.o ZLIB/inftrees.o ZLIB/trees.o ZLIB/uncompr.o ZLIB/zutil.o LZ4/lz4.o LZ4/lz4hc.o LZ4/lz4frame.o LZ4/xxhash.o -Ld:/RCompile/r-compiling/local/local320/lib/x64 -Ld:/RCompile/r-compiling/local/local320/lib -Lc:/biocbld/BBS-3˜1.3-B/R/bin/x64 -lR
installing to c:/biocbld/bbs-3.3-bioc/R/library/gdsfmt/libs/x64
** testing if installed package can be loaded
* DONE (gdsfmt)