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BioC 3.3: BUILD report for flowUtils on morelia

This page was generated on 2016-04-21 13:20:06 -0700 (Thu, 21 Apr 2016).

Package 414/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowUtils 1.35.7
Josef Spidlen
Snapshot Date: 2016-04-20 17:20:35 -0700 (Wed, 20 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/flowUtils
Last Changed Rev: 116619 / Revision: 116626
Last Changed Date: 2016-04-20 14:09:03 -0700 (Wed, 20 Apr 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  ERROR  skipped 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  ERROR  skipped  skipped 
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK [ ERROR ] skipped  skipped 

Summary

Package: flowUtils
Version: 1.35.7
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data flowUtils
StartedAt: 2016-04-20 18:50:42 -0700 (Wed, 20 Apr 2016)
EndedAt: 2016-04-20 18:50:52 -0700 (Wed, 20 Apr 2016)
EllapsedTime: 9.5 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data flowUtils
###
##############################################################################
##############################################################################


* checking for file ‘flowUtils/DESCRIPTION’ ... OK
* preparing ‘flowUtils’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR

Error: processing vignette 'HowTo-flowUtils.Rnw' failed with diagnostics:
 chunk 9 (label = ApplyGatingML1) 
Error in eval(expr, envir, enclos) : could not find function "read.FCS"
Execution halted