Back to the "Multiple platform build/check report" A  B  C  D  E  F [G] H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.3: INSTALL report for GOSemSim on windows2.bioconductor.org

This page was generated on 2015-10-27 12:14:29 -0400 (Tue, 27 Oct 2015).

Package 450/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOSemSim 1.29.0
Guangchuang Yu
Snapshot Date: 2015-10-26 20:20:04 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GOSemSim
Last Changed Rev: 109767 / Revision: 109948
Last Changed Date: 2015-10-19 21:09:38 -0400 (Mon, 19 Oct 2015)
linux2.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
windows2.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GOSemSim
Version: 1.29.0
Command: C:\cygwin64\bin\curl.exe -O http://linux2.bioconductor.org/BBS/3.3/bioc/src/contrib/GOSemSim_1.29.0.tar.gz && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch GOSemSim_1.29.0.tar.gz && rm GOSemSim_1.29.0.tar.gz
StartedAt: 2015-10-26 21:04:37 -0400 (Mon, 26 Oct 2015)
EndedAt: 2015-10-26 21:05:03 -0400 (Mon, 26 Oct 2015)
EllapsedTime: 26.5 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin64\bin\curl.exe -O http://linux2.bioconductor.org/BBS/3.3/bioc/src/contrib/GOSemSim_1.29.0.tar.gz && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch GOSemSim_1.29.0.tar.gz && rm GOSemSim_1.29.0.tar.gz
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  866k  100  866k    0     0  59.1M      0 --:--:-- --:--:-- --:--:-- 84.6M

install for i386

* installing to library 'c:/biocbld/bbs-3.3-bioc/R/library'
* installing *source* package 'GOSemSim' ...
** libs
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG    -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c ICmethod.cpp -o ICmethod.o
ICmethod.cpp: In function 'Rcpp::NumericMatrix infoContentMethod_cpp(Rcpp::StringVector&, Rcpp::StringVector&, Rcpp::List&, Rcpp::NumericVector&, const string&, const string&)':
ICmethod.cpp:82:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:88:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:107:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:118:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:125:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:152:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
g++ -m32 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG    -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
g++ -m32 -shared -s -static-libgcc -o GOSemSim.dll tmp.def ICmethod.o RcppExports.o -Ld:/RCompile/r-compiling/local/local320/lib/i386 -Ld:/RCompile/r-compiling/local/local320/lib -Lc:/biocbld/BBS-3˜1.3-B/R/bin/i386 -lR
installing to c:/biocbld/bbs-3.3-bioc/R/library/GOSemSim/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing to library 'c:/biocbld/bbs-3.3-bioc/R/library'
* installing *source* package 'GOSemSim' ...
** libs
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG    -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c ICmethod.cpp -o ICmethod.o
ICmethod.cpp: In function 'Rcpp::NumericMatrix infoContentMethod_cpp(Rcpp::StringVector&, Rcpp::StringVector&, Rcpp::List&, Rcpp::NumericVector&, const string&, const string&)':
ICmethod.cpp:82:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:88:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:107:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:118:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:125:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:152:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
g++ -m64 -I"c:/biocbld/BBS-3˜1.3-B/R/include" -DNDEBUG    -I"c:/biocbld/bbs-3.3-bioc/R/library/Rcpp/include" -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
g++ -m64 -shared -s -static-libgcc -o GOSemSim.dll tmp.def ICmethod.o RcppExports.o -Ld:/RCompile/r-compiling/local/local320/lib/x64 -Ld:/RCompile/r-compiling/local/local320/lib -Lc:/biocbld/BBS-3˜1.3-B/R/bin/x64 -lR
installing to c:/biocbld/bbs-3.3-bioc/R/library/GOSemSim/libs/x64
** testing if installed package can be loaded
* DONE (GOSemSim)