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This page was generated on 2025-03-17 11:38 -0400 (Mon, 17 Mar 2025).

HostnameOSArch (*)R versionInstalled pkgs
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2025-03-01 r87860 ucrt) -- "Unsuffered Consequences" 4545
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" 4576
kjohnson3macOS 13.7.1 Venturaarm64R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" 4528
kunpeng2Linux (openEuler 24.03 LTS)aarch64R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" 4459
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2011/2313HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SNPediaR 1.33.0  (landing page)
David Montaner
Snapshot Date: 2025-03-16 13:40 -0400 (Sun, 16 Mar 2025)
git_url: https://git.bioconductor.org/packages/SNPediaR
git_branch: devel
git_last_commit: 33c74c4
git_last_commit_date: 2024-10-29 10:12:45 -0400 (Tue, 29 Oct 2024)
palomino7Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.7.1 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published
kunpeng2Linux (openEuler 24.03 LTS) / aarch64  OK    OK    OK  

BUILD results for SNPediaR on palomino7

To the developers/maintainers of the SNPediaR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SNPediaR.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: SNPediaR
Version: 1.33.0
Command: chmod a+r SNPediaR -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data SNPediaR
StartedAt: 2025-03-16 21:42:36 -0400 (Sun, 16 Mar 2025)
EndedAt: 2025-03-16 21:42:47 -0400 (Sun, 16 Mar 2025)
EllapsedTime: 10.7 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r SNPediaR -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data SNPediaR
###
##############################################################################
##############################################################################


* checking for file 'SNPediaR/DESCRIPTION' ... OK
* preparing 'SNPediaR':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'SNPediaR.Rmd' using rmarkdown

Quitting from SNPediaR.Rmd:49-53 [unnamed-chunk-1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! schannel: CertGetCertificateChain trust error CERT_TRUST_IS_UNTRUSTED_ROOT
---
Backtrace:
    ▆
 1. ├─SNPediaR::getPages(titles = "Rs53576")
 2. │ └─RCurl::getURL(pagesURL)
 3. │   └─RCurl::curlPerform(curl = curl, .opts = opts, .encoding = .encoding)
 4. └─RCurl (local) `<fn>`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'SNPediaR.Rmd' failed with diagnostics:
schannel: CertGetCertificateChain trust error CERT_TRUST_IS_UNTRUSTED_ROOT
--- failed re-building 'SNPediaR.Rmd'

SUMMARY: processing the following file failed:
  'SNPediaR.Rmd'

Error: Vignette re-building failed.
Execution halted