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This page was generated on 2025-01-21 11:46 -0500 (Tue, 21 Jan 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-10-21 r87258) -- "Unsuffered Consequences" 4777
palomino7Windows Server 2022 Datacenterx64R Under development (unstable) (2024-10-26 r87273 ucrt) -- "Unsuffered Consequences" 4502
lconwaymacOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4467
kjohnson3macOS 13.7.1 Venturaarm64R Under development (unstable) (2024-11-20 r87352) -- "Unsuffered Consequences" 4422
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch64R Under development (unstable) (2024-11-24 r87369) -- "Unsuffered Consequences" 4406
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 454/2286HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CRISPRseek 1.47.1  (landing page)
Lihua Julie Zhu
Snapshot Date: 2025-01-20 13:40 -0500 (Mon, 20 Jan 2025)
git_url: https://git.bioconductor.org/packages/CRISPRseek
git_branch: devel
git_last_commit: aaa7c57
git_last_commit_date: 2025-01-17 19:54:08 -0500 (Fri, 17 Jan 2025)
nebbiolo1Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped
palomino7Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson3macOS 13.7.1 Ventura / arm64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped


BUILD results for CRISPRseek on kunpeng2

To the developers/maintainers of the CRISPRseek package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CRISPRseek.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.
- See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host.

raw results


Summary

Package: CRISPRseek
Version: 1.47.1
Command: /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data CRISPRseek
StartedAt: 2025-01-20 22:17:11 -0000 (Mon, 20 Jan 2025)
EndedAt: 2025-01-20 22:18:13 -0000 (Mon, 20 Jan 2025)
EllapsedTime: 62.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data CRISPRseek
###
##############################################################################
##############################################################################


* checking for file ‘CRISPRseek/DESCRIPTION’ ... OK
* preparing ‘CRISPRseek’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘CRISPRseek.Rmd’ using rmarkdown

Quitting from lines 73-77 [unnamed-chunk-1] (CRISPRseek.Rmd)
Error: processing vignette 'CRISPRseek.Rmd' failed with diagnostics:
Cannot find the file(s): "../../../../../GitHub/CRISPRseek/inst/extdata/core_functions.png"
--- failed re-building ‘CRISPRseek.Rmd’

SUMMARY: processing the following file failed:
  ‘CRISPRseek.Rmd’

Error: Vignette re-building failed.
Execution halted