BioC 3.2: CHECK report for Prize on windows1.bioconductor.org
This page was generated on 2015-10-27 17:32:23 -0400 (Tue, 27 Oct 2015).
Prize 1.0.0 Daryanaz Dargahi
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015) | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/Prize | Last Changed Rev: 109589 / Revision: 109947 | Last Changed Date: 2015-10-13 15:36:05 -0400 (Tue, 13 Oct 2015) |
| linux1.bioconductor.org | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | OK | |  |
windows1.bioconductor.org | Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | [ OK ] | OK |  |
perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | OK | OK | OK |  |
oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | OK |  |
Summary
Package: Prize
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Version: 1.0.0
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Command: rm -rf Prize.buildbin-libdir Prize.Rcheck && mkdir Prize.buildbin-libdir Prize.Rcheck && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=Prize.buildbin-libdir Prize_1.0.0.tar.gz >Prize.Rcheck\00install.out 2>&1 && cp Prize.Rcheck\00install.out Prize-install.out && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=Prize.buildbin-libdir --install="check:Prize-install.out" --force-multiarch --no-vignettes --timings Prize_1.0.0.tar.gz
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StartedAt: 2015-10-27 04:34:56 -0400 (Tue, 27 Oct 2015)
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EndedAt: 2015-10-27 04:37:34 -0400 (Tue, 27 Oct 2015)
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EllapsedTime: 157.7 seconds
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RetCode: 0
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Status: OK
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CheckDir: Prize.Rcheck
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Warnings: 0
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Command output
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### Running command:
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### rm -rf Prize.buildbin-libdir Prize.Rcheck && mkdir Prize.buildbin-libdir Prize.Rcheck && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=Prize.buildbin-libdir Prize_1.0.0.tar.gz >Prize.Rcheck\00install.out 2>&1 && cp Prize.Rcheck\00install.out Prize-install.out && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=Prize.buildbin-libdir --install="check:Prize-install.out" --force-multiarch --no-vignettes --timings Prize_1.0.0.tar.gz
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* using log directory 'C:/biocbld/bbs-3.2-bioc/meat/Prize.Rcheck'
* using R version 3.2.2 Patched (2015-08-16 r69094)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'Prize/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'Prize' version '1.0.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'Prize' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... [47s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
Prize-package 5.56 0.03 5.6
** running examples for arch 'x64' ... [58s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
Prize-package 6.85 0 6.86
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
Running 'runTests.R' [8s]
[8s] OK
** running tests for arch 'x64' ...
Running 'runTests.R' [10s]
[10s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: OK
Prize.Rcheck/00install.out:
install for i386
* installing *source* package 'Prize' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'Prize' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Prize' as Prize_1.0.0.zip
* DONE (Prize)
Prize.Rcheck/examples_i386/Prize-Ex.timings:
name | user | system | elapsed
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AIJ | 1.93 | 0.00 | 1.94 |
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AIP | 1.27 | 0.00 | 1.27 |
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CI | 2.11 | 0.00 | 2.10 |
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GCR | 2.3 | 0.0 | 2.3 |
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ICR | 3.48 | 0.00 | 3.49 |
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IP | 3.27 | 0.00 | 3.26 |
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Prize-package | 5.56 | 0.03 | 5.60 |
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RM | 0.31 | 0.00 | 0.31 |
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ahmatrix | 0 | 0 | 0 |
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ahp | 0.30 | 0.00 | 0.29 |
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ahp_matrix | 0 | 0 | 0 |
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ahp_plot | 2.45 | 0.01 | 2.47 |
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ahp_weights | 2.69 | 0.00 | 2.69 |
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ahplot | 0.01 | 0.02 | 0.03 |
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crplot | 0.14 | 0.00 | 0.14 |
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dplot | 0.11 | 0.00 | 0.11 |
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gaggregate | 4.18 | 0.00 | 4.17 |
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pipeline | 2.45 | 0.00 | 2.46 |
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rainbow_plot | 2.63 | 0.00 | 2.63 |
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rainbowplot | 0.16 | 0.00 | 0.15 |
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rating | 0.64 | 0.00 | 0.64 |
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saaty_inconsistency | 3.78 | 0.00 | 3.78 |
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simulation | 2.61 | 0.00 | 2.61 |
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weight | 0.63 | 0.00 | 0.63 |
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weight_plot | 2.58 | 0.00 | 2.57 |
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wplot | 0.25 | 0.00 | 0.25 |
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Prize.Rcheck/examples_x64/Prize-Ex.timings:
name | user | system | elapsed
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AIJ | 2.89 | 0.00 | 2.89 |
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AIP | 1.51 | 0.00 | 1.52 |
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CI | 2.44 | 0.00 | 2.44 |
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GCR | 2.41 | 0.00 | 2.40 |
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ICR | 4.53 | 0.00 | 4.53 |
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IP | 4.46 | 0.00 | 4.45 |
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Prize-package | 6.85 | 0.00 | 6.86 |
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RM | 0.36 | 0.03 | 0.39 |
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ahmatrix | 0 | 0 | 0 |
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ahp | 0.38 | 0.00 | 0.38 |
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ahp_matrix | 0 | 0 | 0 |
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ahp_plot | 2.95 | 0.02 | 2.97 |
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ahp_weights | 3.02 | 0.00 | 3.01 |
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ahplot | 0.03 | 0.00 | 0.03 |
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crplot | 0.17 | 0.00 | 0.17 |
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dplot | 0.11 | 0.00 | 0.11 |
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gaggregate | 4.65 | 0.01 | 4.67 |
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pipeline | 3.6 | 0.0 | 3.6 |
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rainbow_plot | 3.31 | 0.02 | 3.32 |
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rainbowplot | 0.19 | 0.00 | 0.19 |
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rating | 0.75 | 0.00 | 0.75 |
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saaty_inconsistency | 4.11 | 0.00 | 4.11 |
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simulation | 3.60 | 0.00 | 3.61 |
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weight | 0.93 | 0.00 | 0.92 |
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weight_plot | 3.43 | 0.00 | 3.44 |
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wplot | 0.3 | 0.0 | 0.3 |
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