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### Running command:
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### chmod a+r a4 -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data a4
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* checking for file 'a4/DESCRIPTION' ... OK
* preparing 'a4':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'a4vignette.Rnw' using Sweave
Loading required package: a4Base
Loading required package: a4Preproc
Loading required package: a4Core
a4Base version 1.52.0
Loading required package: a4Classif
a4Classif version 1.52.0
Loading required package: a4Reporting
a4 version 1.52.0
Loading required package: ALL
Loading required package: Biobase
Loading required package: BiocGenerics
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce,
anyDuplicated, aperm, append,
as.data.frame, basename, cbind,
colnames, dirname, do.call, duplicated,
eval, evalq, get, grep, grepl,
intersect, is.unsorted, lapply, mapply,
match, mget, order, paste, pmax,
pmax.int, pmin, pmin.int, rank, rbind,
rownames, sapply, setdiff, table,
tapply, union, unique, unsplit,
which.max, which.min
Welcome to Bioconductor
Vignettes contain introductory material;
view with 'browseVignettes()'. To cite
Bioconductor, see 'citation("Biobase")',
and for packages 'citation("pkgname")'.
Loading required package: nlcv
Failed with error: 'package 'MLInterfaces' required by 'nlcv' could not be found'
Loading required package: AnnotationDbi
Loading required package: stats4
Loading required package: IRanges
Loading required package: S4Vectors
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Attaching package: 'IRanges'
The following object is masked from 'package:grDevices':
windows
Loading required package: org.Hs.eg.db
Error: processing vignette 'a4vignette.Rnw' failed with diagnostics:
chunk 22 (label = MCRPlot)
Error in mcrPlot(nlcvTT, plot = TRUE, optimalDots = TRUE, layout = TRUE, :
could not find function "mcrPlot"
--- failed re-building 'a4vignette.Rnw'
SUMMARY: processing the following file failed:
'a4vignette.Rnw'
Error: Vignette re-building failed.
Execution halted