Chi-Lam Poon
| Snapshot Date: 2024-06-09 14:00 -0400 (Sun, 09 Jun 2024) |
| git_url: https://git.bioconductor.org/packages/ReactomeGraph4R |
| git_branch: RELEASE_3_19 |
| git_last_commit: a74e4ed |
| git_last_commit_date: 2024-04-30 11:35:14 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-06-11 14:42 -0400 (Tue, 11 Jun 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4757 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.4.0 (2024-04-24 ucrt) -- "Puppy Cup" | 4491 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4522 |
| kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4468 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1712/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ReactomeGraph4R 1.12.0 (landing page) Chi-Lam Poon
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the ReactomeGraph4R package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ReactomeGraph4R.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: ReactomeGraph4R |
| Version: 1.12.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ReactomeGraph4R |
| StartedAt: 2024-06-09 17:52:12 -0400 (Sun, 09 Jun 2024) |
| EndedAt: 2024-06-09 17:52:34 -0400 (Sun, 09 Jun 2024) |
| EllapsedTime: 22.5 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ReactomeGraph4R ### ############################################################################## ############################################################################## * checking for file ‘ReactomeGraph4R/DESCRIPTION’ ... OK * preparing ‘ReactomeGraph4R’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Introduction.Rmd’ using rmarkdown Quitting from lines 218-223 [export-img] (Introduction.Rmd) Error: processing vignette 'Introduction.Rmd' failed with diagnostics: package or namespace load failed for 'ReactomeContentService4R': .onAttach failed in attachNamespace() for 'ReactomeContentService4R', details: call: curl::curl_fetch_memory(url, handle = handle) error: Timeout was reached: [reactome.org] SSL connection timeout --- failed re-building ‘Introduction.Rmd’ SUMMARY: processing the following file failed: ‘Introduction.Rmd’ Error: Vignette re-building failed. Execution halted