| Back to Using R 4.1.3 to BUILD/CHECK a small subset of 3.18 packages |
This page was generated on 2024-03-08 16:41:48 -0500 (Fri, 08 Mar 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 655 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 71/118 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||||
| limma 3.58.1 (landing page) Gordon Smyth
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||
|
To the developers/maintainers of the limma package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: limma |
| Version: 3.58.1 |
| Command: /home/hpages/bbs-3.18-bioc-R41/R/bin/R CMD INSTALL limma |
| StartedAt: 2024-03-08 15:28:25 -0500 (Fri, 08 Mar 2024) |
| EndedAt: 2024-03-08 15:28:42 -0500 (Fri, 08 Mar 2024) |
| EllapsedTime: 16.7 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/hpages/bbs-3.18-bioc-R41/R/bin/R CMD INSTALL limma ### ############################################################################## ############################################################################## * installing to library ‘/home/hpages/bbs-3.18-bioc-R41/R/site-library’ * installing *source* package ‘limma’ ... ** using staged installation ** libs gcc -I"/home/hpages/bbs-3.18-bioc-R41/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c init.c -o init.o gcc -I"/home/hpages/bbs-3.18-bioc-R41/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c normexp.c -o normexp.o gcc -I"/home/hpages/bbs-3.18-bioc-R41/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c weighted_lowess.c -o weighted_lowess.o gcc -shared -L/home/hpages/bbs-3.18-bioc-R41/R/lib -L/usr/local/lib -o limma.so init.o normexp.o weighted_lowess.o -L/home/hpages/bbs-3.18-bioc-R41/R/lib -lR installing to /home/hpages/bbs-3.18-bioc-R41/R/site-library/00LOCK-limma/00new/limma/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ‘intro.Rmd’ using ‘UTF-8’ ‘usersguide.Rnw’ using ‘UTF-8’ ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (limma)