Back to Mac ARM64 build report for BioC 3.17
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2023-10-20 09:38:06 -0400 (Fri, 20 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson2macOS 12.6.1 Montereyarm644.3.1 (2023-06-16) -- "Beagle Scouts" 4347
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1203/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
methylPipe 1.34.1  (landing page)
Mattia Furlan
Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/methylPipe
git_branch: RELEASE_3_17
git_last_commit: 3fd2516
git_last_commit_date: 2023-06-12 08:15:24 -0400 (Mon, 12 Jun 2023)
kjohnson2macOS 12.6.1 Monterey / arm64  OK    OK    ERROR    OK  

BUILD results for methylPipe on kjohnson2


To the developers/maintainers of the methylPipe package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: methylPipe
Version: 1.34.1
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data methylPipe
StartedAt: 2023-10-16 09:41:44 -0400 (Mon, 16 Oct 2023)
EndedAt: 2023-10-16 09:46:15 -0400 (Mon, 16 Oct 2023)
EllapsedTime: 271.1 seconds
RetCode: 0
Status:   OK  
PackageFile: methylPipe_1.34.1.tar.gz
PackageFileSize: 587.3 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data methylPipe
###
##############################################################################
##############################################################################


* checking for file ‘methylPipe/DESCRIPTION’ ... OK
* preparing ‘methylPipe’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘methylPipe/inst/extdata/DMRs.Rdata’
    ‘methylPipe/inst/extdata/GR_chr20.Rdata’
    ‘methylPipe/inst/extdata/gec.H1.Rdata’
    ‘methylPipe/inst/extdata/gec.IMR90.Rdata’
    ‘methylPipe/inst/extdata/uncov_GR.Rdata’
* building ‘methylPipe_1.34.1.tar.gz’