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This page was generated on 2023-10-20 09:38:13 -0400 (Fri, 20 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson2macOS 12.6.1 Montereyarm644.3.1 (2023-06-16) -- "Beagle Scouts" 4347
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2068/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TAPseq 1.12.0  (landing page)
Andreas R. Gschwind
Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/TAPseq
git_branch: RELEASE_3_17
git_last_commit: e3d9c6c
git_last_commit_date: 2023-04-25 11:16:00 -0400 (Tue, 25 Apr 2023)
kjohnson2macOS 12.6.1 Monterey / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

BUILD BIN results for TAPseq on kjohnson2


To the developers/maintainers of the TAPseq package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: TAPseq
Version: 1.12.0
Command: rm -rf TAPseq.buildbin-libdir && mkdir TAPseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh TAPseq_1.12.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R TAPseq.buildbin-libdir
StartedAt: 2023-10-19 17:44:06 -0400 (Thu, 19 Oct 2023)
EndedAt: 2023-10-19 17:45:57 -0400 (Thu, 19 Oct 2023)
EllapsedTime: 111.0 seconds
RetCode: 0
Status:   OK  
PackageFile: TAPseq_1.12.0.tgz
PackageFileSize: 2.974 MiB

Command output

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###
### Running command:
###
###   rm -rf TAPseq.buildbin-libdir && mkdir TAPseq.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh TAPseq_1.12.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R TAPseq.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=TAPseq.buildbin-libdir TAPseq_1.12.0.tar.gz'
>>>>>>> 

* installing *source* package ‘TAPseq’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Following software required by TAPseq is not installed or not in PATH:

	primer3_core
	makeblastdb
	blastn

Please install these tools before trying to use this package!
** testing if installed package can be loaded from final location
Warning: Following software required by TAPseq is not installed or not in PATH:

	primer3_core
	makeblastdb
	blastn

Please install these tools before trying to use this package!
** testing if installed package keeps a record of temporary installation path
* DONE (TAPseq)