Back to Mac ARM64 build report for BioC 3.17
ABCDEFGHIJKLMN[O]PQRSTUVWXYZ

This page was generated on 2023-10-20 09:38:08 -0400 (Fri, 20 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson2macOS 12.6.1 Montereyarm644.3.1 (2023-06-16) -- "Beagle Scouts" 4347
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1420/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OmicsLonDA 1.16.0  (landing page)
Ahmed A. Metwally
Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/OmicsLonDA
git_branch: RELEASE_3_17
git_last_commit: 8ad6456
git_last_commit_date: 2023-04-25 11:09:46 -0400 (Tue, 25 Apr 2023)
kjohnson2macOS 12.6.1 Monterey / arm64  ERROR    ERROR  skippedskipped

BUILD results for OmicsLonDA on kjohnson2


To the developers/maintainers of the OmicsLonDA package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: OmicsLonDA
Version: 1.16.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data OmicsLonDA
StartedAt: 2023-10-16 12:52:34 -0400 (Mon, 16 Oct 2023)
EndedAt: 2023-10-16 12:53:05 -0400 (Mon, 16 Oct 2023)
EllapsedTime: 30.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data OmicsLonDA
###
##############################################################################
##############################################################################


* checking for file ‘OmicsLonDA/DESCRIPTION’ ... OK
* preparing ‘OmicsLonDA’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘OmicsLonDA’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
Warning: namespace ‘OmicsLonDA’ is not available and has been replaced
by .GlobalEnv when processing object ‘omicslonda_data_example’
Warning: namespace ‘OmicsLonDA’ is not available and has been replaced
by .GlobalEnv when processing object ‘omicslonda_data_example’
** byte-compile and prepare package for lazy loading
Error: object ‘colMeans’ is not exported by 'namespace:BiocGenerics'
Execution halted
ERROR: lazy loading failed for package ‘OmicsLonDA’
* removing ‘/private/tmp/Rtmp1QHCLW/Rinstaab824aafb1b/OmicsLonDA’
      -----------------------------------
ERROR: package installation failed