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This page was generated on 2023-10-20 09:38:05 -0400 (Fri, 20 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson2macOS 12.6.1 Montereyarm644.3.1 (2023-06-16) -- "Beagle Scouts" 4347
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1101/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MADSEQ 1.26.0  (landing page)
Yu Kong
Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/MADSEQ
git_branch: RELEASE_3_17
git_last_commit: 8105206
git_last_commit_date: 2023-04-25 10:47:27 -0400 (Tue, 25 Apr 2023)
kjohnson2macOS 12.6.1 Monterey / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published

BUILD results for MADSEQ on kjohnson2


To the developers/maintainers of the MADSEQ package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: MADSEQ
Version: 1.26.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MADSEQ
StartedAt: 2023-10-16 08:02:37 -0400 (Mon, 16 Oct 2023)
EndedAt: 2023-10-16 08:05:07 -0400 (Mon, 16 Oct 2023)
EllapsedTime: 150.3 seconds
RetCode: 0
Status:   OK  
PackageFile: MADSEQ_1.26.0.tar.gz
PackageFileSize: 1.984 MiB

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MADSEQ
###
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* checking for file ‘MADSEQ/DESCRIPTION’ ... OK
* preparing ‘MADSEQ’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘MADSEQ/inst/AQP7/hg19_AQP7_gr.RDS’
    ‘MADSEQ/inst/AQP7/hg38_AQP7_gr.RDS’
    ‘MADSEQ/inst/AQP7/hs37d5_AQP7_gr.RDS’
    ‘MADSEQ/inst/HLA/hg19_HLA_gr.RDS’ ‘MADSEQ/inst/HLA/hg38_HLA_gr.RDS’
    ‘MADSEQ/inst/HLA/hs37d5_HLA_gr.RDS’ ‘MADSEQ/inst/gap/hg19_gap_gr.RDS’
    ‘MADSEQ/inst/gap/hg38_gap_gr.RDS’ ‘MADSEQ/inst/gap/hs37d5_gap_gr.RDS’
* building ‘MADSEQ_1.26.0.tar.gz’