Back to Mac ARM64 build report for BioC 3.17 |
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This page was generated on 2023-10-20 09:38:04 -0400 (Fri, 20 Oct 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kjohnson2 | macOS 12.6.1 Monterey | arm64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4347 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 949/2230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.6.0 (landing page) Matineh Rahmatbakhsh
| kjohnson2 | macOS 12.6.1 Monterey / arm64 | OK | OK | OK | OK | ||||||||
To the developers/maintainers of the HPiP package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: HPiP |
Version: 1.6.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.6.0.tar.gz |
StartedAt: 2023-10-18 01:03:22 -0400 (Wed, 18 Oct 2023) |
EndedAt: 2023-10-18 01:11:13 -0400 (Wed, 18 Oct 2023) |
EllapsedTime: 471.3 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.6.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/HPiP.Rcheck’ * using R version 4.3.1 (2023-06-16) * using platform: aarch64-apple-darwin20 (64-bit) * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Monterey 12.6.7 * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.6.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 42.582 0.969 63.304 corr_plot 40.789 1.029 61.326 FSmethod 39.735 0.996 58.749 pred_ensembel 15.196 0.275 20.017 enrichfindP 0.515 0.081 16.839 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.3.1 (2023-06-16) -- "Beagle Scouts" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: aarch64-apple-darwin20 (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 99.093011 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 106.043014 iter 10 value 93.849227 iter 20 value 93.543689 final value 93.514657 converged Fitting Repeat 3 # weights: 103 initial value 107.281845 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 94.519683 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 96.273292 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 106.548793 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 94.774829 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 101.978797 iter 10 value 93.297653 final value 93.102331 converged Fitting Repeat 4 # weights: 305 initial value 97.311935 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 95.211865 final value 94.484197 converged Fitting Repeat 1 # weights: 507 initial value 99.406244 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 106.604603 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 101.519269 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 103.499455 iter 10 value 94.318609 final value 94.305884 converged Fitting Repeat 5 # weights: 507 initial value 99.968723 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 98.145233 iter 10 value 94.351536 iter 20 value 86.407142 iter 30 value 83.064890 iter 40 value 82.332755 iter 50 value 82.092483 iter 60 value 82.059682 final value 82.059299 converged Fitting Repeat 2 # weights: 103 initial value 98.587546 iter 10 value 94.163240 iter 20 value 89.422796 iter 30 value 83.597208 iter 40 value 82.051682 iter 50 value 82.016871 iter 60 value 81.910021 iter 70 value 81.632849 iter 80 value 81.512130 final value 81.509585 converged Fitting Repeat 3 # weights: 103 initial value 101.592059 iter 10 value 94.504609 iter 20 value 94.487219 iter 30 value 94.259353 iter 40 value 93.834082 iter 50 value 93.776061 iter 60 value 93.769689 iter 70 value 93.768896 iter 80 value 93.768383 final value 93.767892 converged Fitting Repeat 4 # weights: 103 initial value 104.363444 iter 10 value 94.438908 iter 20 value 91.645802 iter 30 value 90.884789 iter 40 value 90.056945 iter 50 value 90.022080 iter 60 value 89.770602 final value 89.769459 converged Fitting Repeat 5 # weights: 103 initial value 112.187169 iter 10 value 94.556282 iter 20 value 94.482744 iter 30 value 91.226755 iter 40 value 90.975508 iter 50 value 90.860460 iter 60 value 90.756500 final value 90.756332 converged Fitting Repeat 1 # weights: 305 initial value 102.026531 iter 10 value 94.659959 iter 20 value 92.861751 iter 30 value 86.084892 iter 40 value 82.037221 iter 50 value 80.432058 iter 60 value 80.130283 iter 70 value 79.854474 iter 80 value 79.406567 iter 90 value 78.520683 iter 100 value 78.041910 final value 78.041910 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 99.649091 iter 10 value 94.548945 iter 20 value 94.488604 iter 30 value 93.925023 iter 40 value 89.178234 iter 50 value 84.918749 iter 60 value 84.311216 iter 70 value 83.800395 iter 80 value 82.958100 iter 90 value 80.352916 iter 100 value 80.105104 final value 80.105104 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 105.980360 iter 10 value 94.772264 iter 20 value 87.227395 iter 30 value 84.485540 iter 40 value 82.429683 iter 50 value 81.014295 iter 60 value 79.862328 iter 70 value 78.939206 iter 80 value 78.751353 iter 90 value 78.658602 iter 100 value 78.646098 final value 78.646098 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 132.797483 iter 10 value 95.830014 iter 20 value 90.515405 iter 30 value 88.468790 iter 40 value 84.526879 iter 50 value 82.522863 iter 60 value 80.542395 iter 70 value 80.077430 iter 80 value 79.718104 iter 90 value 79.599408 iter 100 value 79.394732 final value 79.394732 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 106.156873 iter 10 value 94.486943 iter 20 value 94.290298 iter 30 value 93.274374 iter 40 value 87.568378 iter 50 value 82.826780 iter 60 value 82.088017 iter 70 value 81.370696 iter 80 value 81.312308 iter 90 value 81.225080 iter 100 value 81.179944 final value 81.179944 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 119.624794 iter 10 value 94.482544 iter 20 value 86.049428 iter 30 value 84.357552 iter 40 value 82.932373 iter 50 value 80.524838 iter 60 value 80.349030 iter 70 value 80.114790 iter 80 value 79.219440 iter 90 value 78.612935 iter 100 value 78.137727 final value 78.137727 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 120.580281 iter 10 value 96.371559 iter 20 value 92.706868 iter 30 value 85.004223 iter 40 value 80.119283 iter 50 value 79.793596 iter 60 value 79.306854 iter 70 value 78.179925 iter 80 value 77.875981 iter 90 value 77.561457 iter 100 value 77.526016 final value 77.526016 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 105.467107 iter 10 value 95.693536 iter 20 value 86.044667 iter 30 value 83.173994 iter 40 value 79.919600 iter 50 value 78.354857 iter 60 value 77.823892 iter 70 value 77.573249 iter 80 value 77.490163 iter 90 value 77.418228 iter 100 value 77.261431 final value 77.261431 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 132.160381 iter 10 value 95.058827 iter 20 value 91.300746 iter 30 value 90.527565 iter 40 value 88.739305 iter 50 value 84.221365 iter 60 value 83.564629 iter 70 value 79.508562 iter 80 value 79.200908 iter 90 value 78.817422 iter 100 value 78.132249 final value 78.132249 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 109.923016 iter 10 value 94.776067 iter 20 value 87.965783 iter 30 value 82.517364 iter 40 value 81.988011 iter 50 value 81.062889 iter 60 value 78.802040 iter 70 value 78.075676 iter 80 value 77.916994 iter 90 value 77.841915 iter 100 value 77.683453 final value 77.683453 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.178247 final value 94.485877 converged Fitting Repeat 2 # weights: 103 initial value 94.342376 iter 10 value 82.395387 iter 20 value 81.630554 iter 30 value 80.040000 iter 40 value 79.985883 final value 79.985708 converged Fitting Repeat 3 # weights: 103 initial value 110.969182 final value 94.485959 converged Fitting Repeat 4 # weights: 103 initial value 95.515163 final value 94.485631 converged Fitting Repeat 5 # weights: 103 initial value 98.919979 final value 94.485808 converged Fitting Repeat 1 # weights: 305 initial value 115.823220 iter 10 value 93.788265 iter 20 value 93.786859 final value 93.786140 converged Fitting Repeat 2 # weights: 305 initial value 104.510716 iter 10 value 94.310853 iter 20 value 94.026525 final value 93.851911 converged Fitting Repeat 3 # weights: 305 initial value 113.577314 iter 10 value 94.488608 iter 20 value 94.376908 iter 30 value 84.171911 iter 40 value 83.268024 iter 50 value 83.159222 iter 60 value 83.132131 final value 83.131975 converged Fitting Repeat 4 # weights: 305 initial value 94.960148 iter 10 value 94.447827 iter 20 value 94.443922 iter 30 value 89.897689 iter 40 value 80.433700 iter 50 value 80.386857 iter 60 value 80.380782 iter 70 value 80.365929 iter 80 value 80.346026 final value 80.345973 converged Fitting Repeat 5 # weights: 305 initial value 121.490635 iter 10 value 94.489039 iter 20 value 94.397839 final value 93.922732 converged Fitting Repeat 1 # weights: 507 initial value 94.393767 iter 10 value 87.262737 iter 20 value 85.921737 iter 30 value 85.870313 iter 40 value 85.868257 iter 50 value 85.838275 iter 60 value 85.672427 iter 70 value 85.666161 iter 80 value 85.656952 iter 90 value 81.706674 iter 100 value 81.434492 final value 81.434492 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 111.046925 iter 10 value 93.736730 iter 20 value 93.701682 iter 30 value 93.678007 iter 40 value 93.660282 iter 50 value 93.659456 iter 60 value 93.658521 iter 70 value 92.816555 iter 80 value 92.815012 iter 90 value 92.814728 iter 100 value 92.742421 final value 92.742421 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 101.589494 iter 10 value 94.451393 iter 20 value 93.876228 iter 30 value 93.853125 iter 40 value 93.754554 iter 50 value 93.754238 iter 60 value 93.753388 iter 70 value 93.387371 iter 80 value 83.801495 iter 90 value 83.699087 iter 100 value 83.697820 final value 83.697820 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 99.465687 iter 10 value 94.491745 iter 20 value 94.423329 final value 93.784074 converged Fitting Repeat 5 # weights: 507 initial value 98.640928 iter 10 value 94.491921 iter 20 value 93.740251 iter 30 value 81.957267 iter 40 value 81.933093 iter 50 value 81.916963 iter 60 value 81.659367 iter 70 value 81.654478 final value 81.652489 converged Fitting Repeat 1 # weights: 103 initial value 99.736974 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 99.150730 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 94.864662 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 116.983286 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 96.087004 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 113.058944 iter 10 value 92.845505 iter 20 value 92.521354 final value 92.521274 converged Fitting Repeat 2 # weights: 305 initial value 102.718008 iter 10 value 92.945357 final value 92.945355 converged Fitting Repeat 3 # weights: 305 initial value 123.730549 iter 10 value 92.951436 iter 20 value 92.945356 iter 20 value 92.945355 iter 20 value 92.945355 final value 92.945355 converged Fitting Repeat 4 # weights: 305 initial value 101.510873 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 102.266924 iter 10 value 92.945356 iter 10 value 92.945356 iter 10 value 92.945356 final value 92.945356 converged Fitting Repeat 1 # weights: 507 initial value 100.998000 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 96.624044 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 101.589059 iter 10 value 92.988213 final value 92.945355 converged Fitting Repeat 4 # weights: 507 initial value 109.508172 iter 10 value 92.597284 iter 20 value 90.459032 final value 90.447059 converged Fitting Repeat 5 # weights: 507 initial value 95.708895 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 103.025595 iter 10 value 94.248824 iter 20 value 94.054855 iter 30 value 89.228372 iter 40 value 84.722391 iter 50 value 83.723910 iter 60 value 83.257107 iter 70 value 82.995662 iter 80 value 82.882156 iter 90 value 82.402160 iter 100 value 82.351426 final value 82.351426 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 96.633101 iter 10 value 93.948844 iter 20 value 84.227480 iter 30 value 83.999225 iter 40 value 83.303790 iter 50 value 83.096772 iter 60 value 82.909320 iter 70 value 82.884124 iter 80 value 82.830464 iter 90 value 82.353549 iter 100 value 82.339027 final value 82.339027 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 98.782540 iter 10 value 94.062404 iter 20 value 94.038791 iter 30 value 92.952450 iter 40 value 88.470311 iter 50 value 85.407709 iter 60 value 84.086426 iter 70 value 83.619552 iter 80 value 83.273194 iter 90 value 81.779853 iter 100 value 80.846500 final value 80.846500 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 100.303164 iter 10 value 93.999541 iter 20 value 92.943036 iter 30 value 92.832819 iter 40 value 92.823166 iter 50 value 92.821034 iter 60 value 92.821012 iter 70 value 92.820227 iter 70 value 92.820227 final value 92.820227 converged Fitting Repeat 5 # weights: 103 initial value 96.452489 iter 10 value 94.070679 iter 20 value 94.057325 iter 30 value 87.547066 iter 40 value 84.777415 iter 50 value 83.422855 iter 60 value 83.074903 iter 70 value 82.919954 iter 80 value 82.881614 iter 80 value 82.881614 final value 82.881614 converged Fitting Repeat 1 # weights: 305 initial value 107.966280 iter 10 value 93.295180 iter 20 value 83.778973 iter 30 value 83.433980 iter 40 value 82.846152 iter 50 value 81.183057 iter 60 value 79.496086 iter 70 value 78.965505 iter 80 value 78.419657 iter 90 value 78.181941 iter 100 value 78.020777 final value 78.020777 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.769232 iter 10 value 86.550420 iter 20 value 83.295511 iter 30 value 83.193757 iter 40 value 82.032273 iter 50 value 81.144984 iter 60 value 80.199388 iter 70 value 79.586029 iter 80 value 79.460251 iter 90 value 79.437341 iter 100 value 79.384864 final value 79.384864 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 112.042545 iter 10 value 94.310812 iter 20 value 92.812947 iter 30 value 84.659016 iter 40 value 83.218127 iter 50 value 82.047797 iter 60 value 81.116417 iter 70 value 80.762738 iter 80 value 80.669113 iter 90 value 80.666867 iter 100 value 80.666579 final value 80.666579 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 121.430890 iter 10 value 94.393820 iter 20 value 92.954476 iter 30 value 85.894147 iter 40 value 84.289777 iter 50 value 82.609047 iter 60 value 80.572757 iter 70 value 79.371824 iter 80 value 78.969507 iter 90 value 78.506604 iter 100 value 78.180413 final value 78.180413 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 125.618105 iter 10 value 94.739568 iter 20 value 89.529938 iter 30 value 83.690696 iter 40 value 82.566624 iter 50 value 82.468169 iter 60 value 82.264029 iter 70 value 81.258212 iter 80 value 79.750025 iter 90 value 79.434740 iter 100 value 79.224106 final value 79.224106 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 109.375341 iter 10 value 93.340799 iter 20 value 88.008146 iter 30 value 84.368616 iter 40 value 83.250203 iter 50 value 81.954885 iter 60 value 81.559485 iter 70 value 81.101971 iter 80 value 80.800222 iter 90 value 80.632464 iter 100 value 80.501012 final value 80.501012 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 107.778994 iter 10 value 93.694287 iter 20 value 92.954119 iter 30 value 92.893461 iter 40 value 92.747052 iter 50 value 87.562382 iter 60 value 81.138166 iter 70 value 79.939088 iter 80 value 79.503765 iter 90 value 78.532861 iter 100 value 78.142726 final value 78.142726 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 101.760680 iter 10 value 94.221832 iter 20 value 84.717014 iter 30 value 83.542360 iter 40 value 82.113230 iter 50 value 81.940567 iter 60 value 81.249145 iter 70 value 80.389331 iter 80 value 80.074827 iter 90 value 79.982495 iter 100 value 79.965593 final value 79.965593 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.216253 iter 10 value 94.179058 iter 20 value 93.703883 iter 30 value 92.805961 iter 40 value 92.620491 iter 50 value 89.910036 iter 60 value 85.804468 iter 70 value 84.349392 iter 80 value 81.525941 iter 90 value 80.907920 iter 100 value 80.360737 final value 80.360737 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 117.563642 iter 10 value 96.563254 iter 20 value 93.069265 iter 30 value 84.943091 iter 40 value 81.978866 iter 50 value 80.849771 iter 60 value 80.474655 iter 70 value 79.360232 iter 80 value 78.771243 iter 90 value 78.519722 iter 100 value 78.224830 final value 78.224830 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 100.404880 iter 10 value 94.054399 iter 20 value 94.032997 iter 30 value 93.041901 iter 40 value 92.522604 final value 92.522602 converged Fitting Repeat 2 # weights: 103 initial value 99.636203 iter 10 value 92.947426 iter 20 value 92.946548 iter 30 value 92.943115 iter 40 value 92.523615 iter 50 value 89.136357 iter 60 value 86.078477 iter 70 value 85.669243 iter 80 value 84.097304 iter 90 value 79.866786 iter 100 value 77.696920 final value 77.696920 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 102.290742 iter 10 value 93.728016 iter 20 value 93.723521 iter 30 value 93.157603 iter 40 value 92.541728 iter 50 value 92.521911 iter 60 value 92.521826 final value 92.521824 converged Fitting Repeat 4 # weights: 103 initial value 94.654178 final value 94.054571 converged Fitting Repeat 5 # weights: 103 initial value 95.200349 final value 94.054668 converged Fitting Repeat 1 # weights: 305 initial value 102.788596 iter 10 value 94.057645 iter 20 value 93.859134 iter 30 value 93.809072 iter 40 value 93.516717 iter 50 value 90.011951 iter 60 value 90.010613 iter 70 value 87.375603 iter 80 value 86.265129 iter 90 value 85.988142 final value 85.980466 converged Fitting Repeat 2 # weights: 305 initial value 112.881769 iter 10 value 94.058093 iter 20 value 93.639586 iter 30 value 88.266801 iter 40 value 86.929284 iter 50 value 86.515066 iter 60 value 86.514461 iter 70 value 85.528309 iter 80 value 85.527256 iter 90 value 85.527110 final value 85.526943 converged Fitting Repeat 3 # weights: 305 initial value 101.446382 iter 10 value 93.701772 iter 20 value 93.697531 iter 30 value 93.285155 iter 40 value 87.368260 iter 50 value 86.008091 iter 60 value 81.560888 iter 70 value 81.549378 final value 81.549020 converged Fitting Repeat 4 # weights: 305 initial value 96.531323 iter 10 value 94.056165 iter 20 value 93.473364 final value 92.946331 converged Fitting Repeat 5 # weights: 305 initial value 94.746307 iter 10 value 94.054183 iter 20 value 92.971193 final value 92.945964 converged Fitting Repeat 1 # weights: 507 initial value 119.761142 iter 10 value 94.060718 iter 20 value 94.054373 iter 30 value 93.150844 final value 92.946188 converged Fitting Repeat 2 # weights: 507 initial value 99.815336 iter 10 value 93.637327 iter 20 value 91.635836 iter 30 value 89.131402 iter 40 value 89.027321 iter 50 value 89.025742 iter 60 value 87.200569 iter 70 value 87.197167 iter 80 value 87.197073 iter 90 value 87.196819 iter 100 value 85.983596 final value 85.983596 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 121.278805 iter 10 value 94.055549 iter 20 value 93.907655 iter 30 value 92.947856 final value 92.947854 converged Fitting Repeat 4 # weights: 507 initial value 102.406232 iter 10 value 92.529943 iter 20 value 92.528885 iter 30 value 92.524415 iter 40 value 92.524002 iter 50 value 92.522521 iter 60 value 92.182531 iter 70 value 88.599569 iter 80 value 81.504270 iter 90 value 80.315205 iter 100 value 78.842787 final value 78.842787 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 94.745203 iter 10 value 94.060569 iter 20 value 93.320936 iter 30 value 92.524792 iter 40 value 92.524073 iter 50 value 92.523725 iter 60 value 92.523396 iter 70 value 92.493257 iter 80 value 83.673549 iter 90 value 83.532622 iter 100 value 83.532165 final value 83.532165 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.492494 final value 94.326054 converged Fitting Repeat 2 # weights: 103 initial value 95.923005 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 118.201687 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 109.327916 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 94.989992 iter 10 value 93.246207 iter 20 value 92.395996 iter 30 value 92.389199 final value 92.389186 converged Fitting Repeat 1 # weights: 305 initial value 94.790359 final value 94.466823 converged Fitting Repeat 2 # weights: 305 initial value 103.901183 iter 10 value 92.037797 final value 91.740981 converged Fitting Repeat 3 # weights: 305 initial value 102.426541 iter 10 value 94.466823 iter 10 value 94.466823 iter 10 value 94.466823 final value 94.466823 converged Fitting Repeat 4 # weights: 305 initial value 96.778681 iter 10 value 92.634720 iter 20 value 92.608991 final value 92.608648 converged Fitting Repeat 5 # weights: 305 initial value 98.512682 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 97.023999 final value 94.466823 converged Fitting Repeat 2 # weights: 507 initial value 121.783074 iter 10 value 94.484211 iter 10 value 94.484211 iter 10 value 94.484211 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 123.803193 final value 94.466823 converged Fitting Repeat 4 # weights: 507 initial value 100.704090 iter 10 value 92.574411 final value 92.570161 converged Fitting Repeat 5 # weights: 507 initial value 97.461700 iter 10 value 92.922007 final value 92.921209 converged Fitting Repeat 1 # weights: 103 initial value 106.027921 iter 10 value 94.043030 iter 20 value 84.765424 iter 30 value 81.747074 iter 40 value 80.059334 iter 50 value 79.845797 iter 60 value 79.189583 iter 70 value 78.687268 iter 80 value 78.633340 final value 78.633339 converged Fitting Repeat 2 # weights: 103 initial value 103.363283 iter 10 value 94.450702 iter 20 value 84.557088 iter 30 value 82.677038 iter 40 value 81.774932 iter 50 value 81.701210 iter 60 value 79.159019 iter 70 value 78.652887 iter 80 value 78.590311 iter 90 value 78.451275 final value 78.446458 converged Fitting Repeat 3 # weights: 103 initial value 100.309600 iter 10 value 94.495091 iter 20 value 86.500065 iter 30 value 84.129257 iter 40 value 83.755848 iter 50 value 81.454719 iter 60 value 81.136626 iter 70 value 81.083262 final value 81.078190 converged Fitting Repeat 4 # weights: 103 initial value 104.595913 iter 10 value 94.486559 iter 20 value 90.365366 iter 30 value 86.149998 iter 40 value 84.335601 iter 50 value 84.158559 iter 60 value 83.828878 iter 70 value 80.777617 iter 80 value 80.041199 iter 90 value 79.021912 iter 100 value 78.790059 final value 78.790059 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 99.608015 iter 10 value 94.224667 iter 20 value 86.273152 iter 30 value 83.201875 iter 40 value 80.416853 iter 50 value 79.459329 iter 60 value 79.371517 iter 70 value 79.311395 iter 80 value 79.172943 iter 90 value 79.011534 iter 100 value 78.805014 final value 78.805014 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 107.375946 iter 10 value 94.509733 iter 20 value 94.403085 iter 30 value 84.731851 iter 40 value 84.160467 iter 50 value 82.555969 iter 60 value 80.574208 iter 70 value 78.646527 iter 80 value 77.587842 iter 90 value 77.397614 iter 100 value 77.210017 final value 77.210017 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.628236 iter 10 value 94.325924 iter 20 value 93.878768 iter 30 value 86.737926 iter 40 value 84.906443 iter 50 value 82.677387 iter 60 value 81.808068 iter 70 value 81.512180 iter 80 value 80.142146 iter 90 value 78.377329 iter 100 value 77.874408 final value 77.874408 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 126.528101 iter 10 value 94.505863 iter 20 value 91.770269 iter 30 value 85.125691 iter 40 value 83.357959 iter 50 value 82.991500 iter 60 value 80.132296 iter 70 value 78.708105 iter 80 value 78.345462 iter 90 value 78.233634 iter 100 value 77.601820 final value 77.601820 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 111.199388 iter 10 value 97.603459 iter 20 value 95.538566 iter 30 value 87.369266 iter 40 value 83.259408 iter 50 value 79.380454 iter 60 value 78.838666 iter 70 value 78.412441 iter 80 value 77.988078 iter 90 value 77.575542 iter 100 value 77.422538 final value 77.422538 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 117.953034 iter 10 value 94.724477 iter 20 value 92.640455 iter 30 value 85.789685 iter 40 value 84.466578 iter 50 value 82.403760 iter 60 value 81.739710 iter 70 value 81.463356 iter 80 value 80.523033 iter 90 value 80.088495 iter 100 value 79.713452 final value 79.713452 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 112.235872 iter 10 value 94.500790 iter 20 value 93.952982 iter 30 value 82.445759 iter 40 value 82.183892 iter 50 value 81.541406 iter 60 value 80.168688 iter 70 value 79.061475 iter 80 value 78.199605 iter 90 value 78.042219 iter 100 value 77.826341 final value 77.826341 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 121.268887 iter 10 value 92.728352 iter 20 value 88.391404 iter 30 value 82.108874 iter 40 value 80.785624 iter 50 value 80.679340 iter 60 value 80.333087 iter 70 value 80.256294 iter 80 value 80.190100 iter 90 value 79.914443 iter 100 value 79.440868 final value 79.440868 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 115.782781 iter 10 value 94.669375 iter 20 value 89.137814 iter 30 value 85.531453 iter 40 value 80.775892 iter 50 value 79.416424 iter 60 value 78.812748 iter 70 value 77.690653 iter 80 value 77.548549 iter 90 value 77.304939 iter 100 value 77.201051 final value 77.201051 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 105.404450 iter 10 value 94.625888 iter 20 value 86.150458 iter 30 value 85.057945 iter 40 value 83.951504 iter 50 value 82.498484 iter 60 value 81.289635 iter 70 value 81.151268 iter 80 value 81.009599 iter 90 value 79.636487 iter 100 value 78.303670 final value 78.303670 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 104.829686 iter 10 value 94.483814 iter 20 value 83.526624 iter 30 value 82.157826 iter 40 value 81.958706 iter 50 value 80.492758 iter 60 value 79.381887 iter 70 value 79.004839 iter 80 value 78.454142 iter 90 value 77.960999 iter 100 value 77.827884 final value 77.827884 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 104.344671 final value 94.485762 converged Fitting Repeat 2 # weights: 103 initial value 95.911214 final value 94.486116 converged Fitting Repeat 3 # weights: 103 initial value 95.349168 final value 94.485648 converged Fitting Repeat 4 # weights: 103 initial value 98.806476 final value 94.485702 converged Fitting Repeat 5 # weights: 103 initial value 97.830934 final value 94.486083 converged Fitting Repeat 1 # weights: 305 initial value 103.869133 iter 10 value 94.488600 iter 20 value 94.320170 iter 30 value 87.938396 iter 40 value 87.877477 iter 50 value 87.708603 iter 60 value 87.691509 iter 70 value 83.978801 iter 80 value 81.445477 iter 90 value 80.352005 iter 100 value 79.961928 final value 79.961928 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.919410 iter 10 value 94.489210 iter 20 value 86.034939 iter 30 value 83.800670 iter 40 value 83.799143 final value 83.798398 converged Fitting Repeat 3 # weights: 305 initial value 106.316624 iter 10 value 94.489259 iter 20 value 94.471805 iter 30 value 92.365224 iter 40 value 88.917409 iter 50 value 87.933369 iter 60 value 82.957677 iter 70 value 82.170281 iter 80 value 79.498462 iter 90 value 77.989685 iter 100 value 77.857461 final value 77.857461 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 101.342011 iter 10 value 94.485550 iter 20 value 93.505510 iter 30 value 91.167042 final value 91.166956 converged Fitting Repeat 5 # weights: 305 initial value 110.910273 iter 10 value 94.471625 iter 20 value 94.467335 iter 30 value 94.271544 iter 40 value 83.789629 iter 50 value 83.787061 iter 60 value 83.784871 iter 70 value 81.013884 iter 80 value 81.013680 iter 80 value 81.013680 final value 81.013680 converged Fitting Repeat 1 # weights: 507 initial value 107.334332 iter 10 value 94.475774 iter 20 value 94.060883 iter 30 value 93.910176 iter 40 value 91.178906 iter 50 value 91.166577 final value 91.166550 converged Fitting Repeat 2 # weights: 507 initial value 102.109041 iter 10 value 94.334068 iter 20 value 94.326513 iter 30 value 84.903239 iter 40 value 83.458883 iter 50 value 80.092112 final value 79.996814 converged Fitting Repeat 3 # weights: 507 initial value 106.267370 iter 10 value 93.578818 iter 20 value 93.495325 iter 30 value 91.169268 iter 40 value 91.161184 iter 50 value 91.159691 iter 60 value 91.158886 final value 91.158879 converged Fitting Repeat 4 # weights: 507 initial value 112.375012 iter 10 value 94.333971 iter 20 value 94.188556 iter 30 value 93.880371 final value 93.880081 converged Fitting Repeat 5 # weights: 507 initial value 109.544778 iter 10 value 92.616948 iter 20 value 92.610805 iter 30 value 92.233650 iter 40 value 84.561849 iter 50 value 81.628594 iter 60 value 79.264523 iter 70 value 78.199316 iter 80 value 76.561065 iter 90 value 76.245005 iter 100 value 76.086090 final value 76.086090 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.868445 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 106.895761 final value 93.903984 converged Fitting Repeat 3 # weights: 103 initial value 97.735739 final value 94.008696 converged Fitting Repeat 4 # weights: 103 initial value 95.101965 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 96.445385 final value 94.052911 converged Fitting Repeat 1 # weights: 305 initial value 95.875485 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 96.316852 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 100.445710 iter 10 value 94.032972 final value 94.032967 converged Fitting Repeat 4 # weights: 305 initial value 97.797379 iter 10 value 93.628702 iter 20 value 93.277632 iter 30 value 93.277172 final value 93.277164 converged Fitting Repeat 5 # weights: 305 initial value 100.005468 iter 10 value 91.837911 iter 20 value 86.346492 iter 30 value 85.079192 iter 40 value 83.167883 iter 50 value 83.122943 iter 60 value 83.070115 final value 83.067455 converged Fitting Repeat 1 # weights: 507 initial value 106.173615 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 113.882300 iter 10 value 93.986764 iter 10 value 93.986764 iter 10 value 93.986764 final value 93.986764 converged Fitting Repeat 3 # weights: 507 initial value 97.660687 final value 93.723634 converged Fitting Repeat 4 # weights: 507 initial value 95.377641 final value 94.032967 converged Fitting Repeat 5 # weights: 507 initial value 113.722384 final value 94.032967 converged Fitting Repeat 1 # weights: 103 initial value 96.218149 iter 10 value 94.036005 iter 20 value 87.784746 iter 30 value 85.560812 iter 40 value 85.021679 iter 50 value 84.064111 iter 60 value 83.488665 iter 70 value 83.398020 iter 80 value 83.326556 final value 83.323541 converged Fitting Repeat 2 # weights: 103 initial value 99.820919 iter 10 value 94.056501 iter 20 value 94.019008 iter 30 value 92.174276 iter 40 value 88.658081 iter 50 value 85.564036 iter 60 value 84.600722 iter 70 value 83.389426 iter 80 value 82.875338 iter 90 value 82.672757 iter 100 value 82.500461 final value 82.500461 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 100.208291 iter 10 value 94.057993 iter 20 value 88.432026 iter 30 value 86.687595 iter 40 value 85.846307 iter 50 value 85.567463 iter 60 value 85.387623 iter 70 value 84.570125 iter 80 value 83.437757 iter 90 value 83.037719 iter 100 value 83.032931 final value 83.032931 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 99.811435 iter 10 value 94.042629 iter 20 value 93.062627 iter 30 value 92.649199 iter 40 value 92.577596 iter 50 value 92.533718 iter 60 value 92.482540 final value 92.481188 converged Fitting Repeat 5 # weights: 103 initial value 107.199545 iter 10 value 94.042871 iter 20 value 91.672879 iter 30 value 87.121264 iter 40 value 86.158218 iter 50 value 84.358555 iter 60 value 83.579004 iter 70 value 83.172948 iter 80 value 82.886608 iter 90 value 82.667185 final value 82.667114 converged Fitting Repeat 1 # weights: 305 initial value 110.862593 iter 10 value 94.050849 iter 20 value 92.413919 iter 30 value 84.975086 iter 40 value 83.686800 iter 50 value 83.320678 iter 60 value 83.205481 iter 70 value 83.053602 iter 80 value 82.836461 iter 90 value 82.109595 iter 100 value 81.666507 final value 81.666507 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 111.823303 iter 10 value 94.121021 iter 20 value 90.646823 iter 30 value 87.253040 iter 40 value 86.811691 iter 50 value 86.615068 iter 60 value 86.364572 iter 70 value 85.767955 iter 80 value 84.042467 iter 90 value 83.060072 iter 100 value 82.491093 final value 82.491093 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 111.596629 iter 10 value 94.084227 iter 20 value 87.039884 iter 30 value 85.304612 iter 40 value 84.983930 iter 50 value 83.517453 iter 60 value 82.908157 iter 70 value 82.204391 iter 80 value 81.835634 iter 90 value 81.748772 iter 100 value 81.705816 final value 81.705816 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 104.318426 iter 10 value 94.059069 iter 20 value 91.283278 iter 30 value 89.629861 iter 40 value 87.151978 iter 50 value 82.140935 iter 60 value 81.311781 iter 70 value 80.550416 iter 80 value 80.088826 iter 90 value 80.014739 iter 100 value 79.974179 final value 79.974179 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 97.208089 iter 10 value 87.591146 iter 20 value 86.185892 iter 30 value 84.373048 iter 40 value 82.981783 iter 50 value 82.605682 iter 60 value 82.500387 iter 70 value 82.233252 iter 80 value 82.042063 iter 90 value 81.327165 iter 100 value 80.609096 final value 80.609096 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 108.423026 iter 10 value 94.117248 iter 20 value 88.352075 iter 30 value 85.642819 iter 40 value 84.962713 iter 50 value 82.749076 iter 60 value 82.328551 iter 70 value 81.726583 iter 80 value 81.240900 iter 90 value 81.007718 iter 100 value 80.840611 final value 80.840611 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 110.205790 iter 10 value 92.583901 iter 20 value 87.423458 iter 30 value 86.447537 iter 40 value 86.273698 iter 50 value 83.469386 iter 60 value 81.752986 iter 70 value 80.746826 iter 80 value 80.526102 iter 90 value 80.467864 iter 100 value 80.432520 final value 80.432520 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 111.723397 iter 10 value 94.559938 iter 20 value 86.509404 iter 30 value 84.817581 iter 40 value 84.160749 iter 50 value 83.578810 iter 60 value 83.325234 iter 70 value 82.977867 iter 80 value 82.075745 iter 90 value 81.977374 iter 100 value 81.723592 final value 81.723592 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.261387 iter 10 value 93.907648 iter 20 value 91.469172 iter 30 value 86.750985 iter 40 value 85.287740 iter 50 value 82.112976 iter 60 value 80.916077 iter 70 value 80.696051 iter 80 value 80.325829 iter 90 value 80.166856 iter 100 value 79.952731 final value 79.952731 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 103.598347 iter 10 value 93.986063 iter 20 value 85.734943 iter 30 value 84.834427 iter 40 value 84.359167 iter 50 value 83.530007 iter 60 value 80.922053 iter 70 value 80.540603 iter 80 value 80.411181 iter 90 value 80.332095 iter 100 value 80.316540 final value 80.316540 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.057672 iter 10 value 94.003832 iter 20 value 93.964042 iter 30 value 93.963881 iter 40 value 93.913085 iter 50 value 93.912843 final value 93.912765 converged Fitting Repeat 2 # weights: 103 initial value 98.339436 final value 94.054552 converged Fitting Repeat 3 # weights: 103 initial value 117.605055 final value 94.054565 converged Fitting Repeat 4 # weights: 103 initial value 94.853974 final value 93.993062 converged Fitting Repeat 5 # weights: 103 initial value 98.242100 final value 94.054463 converged Fitting Repeat 1 # weights: 305 initial value 110.414443 iter 10 value 94.058262 iter 20 value 94.047128 iter 30 value 93.842625 iter 40 value 90.890294 iter 50 value 90.829747 iter 60 value 90.817402 final value 90.816242 converged Fitting Repeat 2 # weights: 305 initial value 95.575856 iter 10 value 94.038385 iter 20 value 94.035728 iter 30 value 94.033955 final value 94.033953 converged Fitting Repeat 3 # weights: 305 initial value 111.774543 iter 10 value 94.038155 iter 20 value 88.729987 iter 30 value 87.022456 iter 40 value 84.605304 iter 50 value 84.596406 final value 84.596400 converged Fitting Repeat 4 # weights: 305 initial value 95.253867 iter 10 value 94.038143 iter 20 value 94.033092 iter 30 value 93.593875 iter 40 value 93.204255 final value 93.204016 converged Fitting Repeat 5 # weights: 305 initial value 119.380344 iter 10 value 94.058175 iter 20 value 94.053208 iter 30 value 86.473543 iter 40 value 86.394532 iter 50 value 86.393292 iter 60 value 86.341071 final value 86.341068 converged Fitting Repeat 1 # weights: 507 initial value 110.101429 iter 10 value 94.042536 iter 20 value 94.034073 iter 30 value 86.136436 iter 40 value 85.536304 final value 85.535513 converged Fitting Repeat 2 # weights: 507 initial value 94.489513 iter 10 value 88.126940 iter 20 value 85.544042 iter 30 value 85.160215 iter 40 value 85.123075 iter 50 value 84.661093 iter 60 value 84.173631 iter 70 value 84.098394 iter 80 value 84.097719 iter 90 value 84.094821 iter 100 value 84.069964 final value 84.069964 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 115.645518 iter 10 value 93.908103 iter 20 value 91.111445 iter 30 value 87.693698 iter 40 value 85.255534 iter 50 value 84.785225 iter 60 value 84.719088 iter 70 value 84.708052 iter 80 value 84.704065 final value 84.704042 converged Fitting Repeat 4 # weights: 507 initial value 94.934209 iter 10 value 94.060674 iter 20 value 94.004201 iter 30 value 92.395973 iter 40 value 89.416262 iter 50 value 85.117033 iter 60 value 84.491417 iter 70 value 83.697504 iter 80 value 82.987153 iter 90 value 82.892873 iter 100 value 79.649981 final value 79.649981 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 118.330325 iter 10 value 89.131988 iter 20 value 85.680298 iter 30 value 85.508900 iter 40 value 85.502146 iter 50 value 85.495431 iter 60 value 85.139209 final value 85.136657 converged Fitting Repeat 1 # weights: 103 initial value 105.461413 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 108.596406 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 99.185103 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 97.052593 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 102.754445 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 95.831041 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 95.693682 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 110.894830 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 95.578709 iter 10 value 92.000909 iter 20 value 91.893361 iter 30 value 91.893280 iter 30 value 91.893279 iter 30 value 91.893279 final value 91.893279 converged Fitting Repeat 5 # weights: 305 initial value 104.000039 iter 10 value 94.312038 iter 10 value 94.312038 iter 10 value 94.312038 final value 94.312038 converged Fitting Repeat 1 # weights: 507 initial value 96.847490 iter 10 value 92.015970 iter 20 value 89.427882 iter 30 value 88.455378 iter 40 value 88.443663 final value 88.443641 converged Fitting Repeat 2 # weights: 507 initial value 94.857420 final value 94.466823 converged Fitting Repeat 3 # weights: 507 initial value 110.554711 final value 94.466823 converged Fitting Repeat 4 # weights: 507 initial value 112.469103 iter 10 value 94.147256 final value 94.145584 converged Fitting Repeat 5 # weights: 507 initial value 120.824103 final value 94.466823 converged Fitting Repeat 1 # weights: 103 initial value 103.879303 iter 10 value 94.259539 iter 20 value 92.760721 iter 30 value 88.187640 iter 40 value 87.965896 iter 50 value 87.570957 iter 60 value 86.301384 iter 70 value 85.888457 iter 80 value 85.811125 final value 85.809966 converged Fitting Repeat 2 # weights: 103 initial value 105.260790 iter 10 value 94.488258 iter 20 value 93.726549 iter 30 value 89.357484 iter 40 value 88.876190 iter 50 value 88.593574 iter 60 value 88.587327 final value 88.586097 converged Fitting Repeat 3 # weights: 103 initial value 96.646456 iter 10 value 94.476752 iter 20 value 93.813760 iter 30 value 89.347276 iter 40 value 88.935106 iter 50 value 88.807187 iter 60 value 88.601630 final value 88.586097 converged Fitting Repeat 4 # weights: 103 initial value 102.271146 iter 10 value 94.487486 iter 20 value 94.217798 iter 30 value 94.128356 iter 40 value 94.044078 iter 50 value 91.772033 iter 60 value 90.173786 iter 70 value 89.536991 iter 80 value 88.754124 iter 90 value 88.586968 final value 88.586097 converged Fitting Repeat 5 # weights: 103 initial value 103.516912 iter 10 value 91.445983 iter 20 value 89.232782 iter 30 value 89.150946 iter 40 value 88.705037 iter 50 value 88.547652 final value 88.541845 converged Fitting Repeat 1 # weights: 305 initial value 119.052654 iter 10 value 94.260476 iter 20 value 90.586662 iter 30 value 88.938550 iter 40 value 87.053589 iter 50 value 86.430663 iter 60 value 86.220323 iter 70 value 86.062300 iter 80 value 85.925326 iter 90 value 85.756621 iter 100 value 85.621511 final value 85.621511 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 105.200872 iter 10 value 94.352778 iter 20 value 88.259727 iter 30 value 87.381786 iter 40 value 86.529899 iter 50 value 85.323434 iter 60 value 84.826549 iter 70 value 84.770971 iter 80 value 84.764980 iter 90 value 84.756608 iter 100 value 84.742766 final value 84.742766 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.672303 iter 10 value 94.597171 iter 20 value 94.204372 iter 30 value 90.933757 iter 40 value 88.139786 iter 50 value 86.518450 iter 60 value 86.111639 iter 70 value 86.053084 iter 80 value 85.978610 iter 90 value 85.832008 iter 100 value 85.755847 final value 85.755847 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 114.745573 iter 10 value 93.803622 iter 20 value 93.133039 iter 30 value 89.507595 iter 40 value 89.015274 iter 50 value 88.760331 iter 60 value 88.309297 iter 70 value 85.950433 iter 80 value 85.708366 iter 90 value 85.211503 iter 100 value 85.091924 final value 85.091924 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 120.969045 iter 10 value 94.635753 iter 20 value 94.397230 iter 30 value 89.763732 iter 40 value 87.801554 iter 50 value 87.083251 iter 60 value 86.019352 iter 70 value 85.817343 iter 80 value 85.636768 iter 90 value 85.286486 iter 100 value 85.057626 final value 85.057626 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.155602 iter 10 value 94.805165 iter 20 value 94.184519 iter 30 value 89.883099 iter 40 value 89.337954 iter 50 value 88.676082 iter 60 value 85.882437 iter 70 value 85.135933 iter 80 value 84.967992 iter 90 value 84.820396 iter 100 value 84.634657 final value 84.634657 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 105.529530 iter 10 value 95.325706 iter 20 value 94.785308 iter 30 value 92.642567 iter 40 value 90.795603 iter 50 value 89.234706 iter 60 value 87.044432 iter 70 value 86.153767 iter 80 value 85.633888 iter 90 value 84.959943 iter 100 value 84.547505 final value 84.547505 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 108.557987 iter 10 value 95.172431 iter 20 value 94.363624 iter 30 value 91.532377 iter 40 value 89.742213 iter 50 value 89.023639 iter 60 value 86.742925 iter 70 value 85.173008 iter 80 value 85.003031 iter 90 value 84.849256 iter 100 value 84.536694 final value 84.536694 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 112.877244 iter 10 value 97.223675 iter 20 value 91.189425 iter 30 value 88.552062 iter 40 value 86.023642 iter 50 value 85.813737 iter 60 value 85.429010 iter 70 value 85.222517 iter 80 value 84.917383 iter 90 value 84.887708 iter 100 value 84.878081 final value 84.878081 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 118.894769 iter 10 value 94.499125 iter 20 value 94.441305 iter 30 value 90.032023 iter 40 value 89.066983 iter 50 value 88.194381 iter 60 value 87.487275 iter 70 value 86.505609 iter 80 value 86.453479 iter 90 value 86.421066 iter 100 value 86.348631 final value 86.348631 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.031325 final value 94.485923 converged Fitting Repeat 2 # weights: 103 initial value 101.693679 iter 10 value 94.486013 iter 20 value 94.484225 iter 30 value 94.157646 final value 94.112854 converged Fitting Repeat 3 # weights: 103 initial value 104.721175 final value 94.485956 converged Fitting Repeat 4 # weights: 103 initial value 108.593678 final value 94.485844 converged Fitting Repeat 5 # weights: 103 initial value 98.274795 final value 94.485771 converged Fitting Repeat 1 # weights: 305 initial value 104.403733 iter 10 value 94.488829 iter 20 value 94.477917 iter 30 value 93.888294 iter 40 value 89.047714 iter 50 value 88.272498 iter 60 value 86.391108 iter 70 value 86.306753 iter 80 value 86.305447 iter 90 value 86.302837 iter 100 value 86.301973 final value 86.301973 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 98.918638 iter 10 value 94.317535 iter 20 value 94.313311 iter 30 value 94.312479 iter 40 value 94.303929 iter 50 value 94.289415 final value 94.289382 converged Fitting Repeat 3 # weights: 305 initial value 110.700276 iter 10 value 94.488811 iter 20 value 94.468779 iter 30 value 93.302740 iter 40 value 86.924256 iter 50 value 85.484375 iter 60 value 85.271699 iter 70 value 85.265661 iter 80 value 85.265233 iter 80 value 85.265233 iter 80 value 85.265233 final value 85.265233 converged Fitting Repeat 4 # weights: 305 initial value 98.880702 iter 10 value 94.471723 iter 20 value 93.225324 iter 30 value 93.216673 iter 40 value 93.205002 iter 50 value 93.203205 iter 60 value 93.201547 final value 93.201478 converged Fitting Repeat 5 # weights: 305 initial value 116.687414 iter 10 value 94.471493 iter 20 value 94.053366 iter 30 value 89.221267 iter 40 value 88.559345 iter 50 value 88.445535 iter 60 value 87.219672 iter 70 value 85.451160 iter 80 value 85.246562 iter 90 value 84.905046 iter 100 value 84.623951 final value 84.623951 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 97.853682 iter 10 value 94.461464 iter 20 value 94.320144 iter 30 value 94.179810 iter 40 value 92.848113 iter 50 value 92.609979 iter 60 value 92.606389 iter 70 value 90.808142 iter 80 value 90.777142 iter 90 value 90.771967 iter 100 value 90.755700 final value 90.755700 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 97.337767 iter 10 value 89.453726 iter 20 value 87.602610 iter 30 value 87.502259 final value 87.501958 converged Fitting Repeat 3 # weights: 507 initial value 98.730632 iter 10 value 94.488752 iter 20 value 92.576148 iter 30 value 89.345845 iter 40 value 89.223954 iter 50 value 89.209718 iter 60 value 88.603027 iter 70 value 85.847443 iter 80 value 85.517823 iter 90 value 85.497758 iter 100 value 85.484001 final value 85.484001 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 96.208624 iter 10 value 94.475482 iter 20 value 94.340114 iter 30 value 94.300620 iter 40 value 94.097100 iter 50 value 94.076206 iter 60 value 94.070363 iter 70 value 94.054685 final value 94.054585 converged Fitting Repeat 5 # weights: 507 initial value 116.676299 iter 10 value 94.476037 iter 20 value 94.333260 iter 30 value 92.576321 iter 40 value 89.472229 iter 50 value 87.606684 iter 60 value 86.167948 iter 70 value 85.251492 iter 80 value 84.689959 iter 90 value 84.473534 iter 100 value 84.215480 final value 84.215480 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 135.378197 iter 10 value 117.809369 iter 20 value 113.397455 iter 30 value 109.673209 iter 40 value 108.821133 iter 50 value 108.530953 iter 60 value 105.859777 iter 70 value 104.486534 iter 80 value 103.048232 iter 90 value 101.663201 iter 100 value 101.374138 final value 101.374138 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 140.147514 iter 10 value 117.914791 iter 20 value 116.604792 iter 30 value 112.396371 iter 40 value 110.175405 iter 50 value 106.142796 iter 60 value 105.358677 iter 70 value 104.753431 iter 80 value 103.337003 iter 90 value 102.278780 iter 100 value 101.317909 final value 101.317909 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 156.515406 iter 10 value 117.383356 iter 20 value 106.279592 iter 30 value 104.793780 iter 40 value 104.115954 iter 50 value 103.588207 iter 60 value 103.090249 iter 70 value 102.680217 iter 80 value 102.558113 iter 90 value 102.079008 iter 100 value 101.397457 final value 101.397457 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 130.011097 iter 10 value 114.411801 iter 20 value 106.463184 iter 30 value 105.900442 iter 40 value 103.809510 iter 50 value 103.206731 iter 60 value 102.358734 iter 70 value 102.077611 iter 80 value 101.993389 iter 90 value 101.960257 iter 100 value 101.830182 final value 101.830182 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 142.256383 iter 10 value 117.309463 iter 20 value 108.773385 iter 30 value 105.785509 iter 40 value 105.135192 iter 50 value 104.920498 iter 60 value 104.275289 iter 70 value 102.059518 iter 80 value 101.575139 iter 90 value 101.308490 iter 100 value 101.145154 final value 101.145154 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Wed Oct 18 01:10:57 2023 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 45.545 1.186 75.636
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 39.735 | 0.996 | 58.749 | |
FreqInteractors | 0.276 | 0.017 | 0.439 | |
calculateAAC | 0.046 | 0.007 | 0.089 | |
calculateAutocor | 0.389 | 0.042 | 0.633 | |
calculateCTDC | 0.097 | 0.004 | 0.155 | |
calculateCTDD | 0.785 | 0.047 | 1.277 | |
calculateCTDT | 0.267 | 0.011 | 0.422 | |
calculateCTriad | 0.388 | 0.015 | 0.616 | |
calculateDC | 0.102 | 0.011 | 0.174 | |
calculateF | 0.385 | 0.012 | 0.602 | |
calculateKSAAP | 0.106 | 0.009 | 0.174 | |
calculateQD_Sm | 1.966 | 0.059 | 3.027 | |
calculateTC | 1.911 | 0.145 | 3.113 | |
calculateTC_Sm | 0.280 | 0.011 | 0.433 | |
corr_plot | 40.789 | 1.029 | 61.326 | |
enrichfindP | 0.515 | 0.081 | 16.839 | |
enrichfind_hp | 0.076 | 0.012 | 1.303 | |
enrichplot | 0.293 | 0.007 | 0.432 | |
filter_missing_values | 0.001 | 0.000 | 0.002 | |
getFASTA | 0.086 | 0.013 | 4.150 | |
getHPI | 0.000 | 0.000 | 0.001 | |
get_negativePPI | 0.002 | 0.001 | 0.005 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.002 | 0.000 | 0.003 | |
plotPPI | 0.071 | 0.005 | 0.123 | |
pred_ensembel | 15.196 | 0.275 | 20.017 | |
var_imp | 42.582 | 0.969 | 63.304 | |