Back to Mac ARM64 build report for BioC 3.17
ABCD[E]FGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2023-10-20 09:38:01 -0400 (Fri, 20 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson2macOS 12.6.1 Montereyarm644.3.1 (2023-06-16) -- "Beagle Scouts" 4347
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 623/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ELMER 2.24.1  (landing page)
Tiago Chedraoui Silva
Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/ELMER
git_branch: RELEASE_3_17
git_last_commit: 5c6fd17
git_last_commit_date: 2023-05-07 16:43:07 -0400 (Sun, 07 May 2023)
kjohnson2macOS 12.6.1 Monterey / arm64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

BUILD BIN results for ELMER on kjohnson2


To the developers/maintainers of the ELMER package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: ELMER
Version: 2.24.1
Command: rm -rf ELMER.buildbin-libdir && mkdir ELMER.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ELMER_2.24.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R ELMER.buildbin-libdir
StartedAt: 2023-10-19 13:01:31 -0400 (Thu, 19 Oct 2023)
EndedAt: 2023-10-19 13:04:24 -0400 (Thu, 19 Oct 2023)
EllapsedTime: 173.1 seconds
RetCode: 0
Status:   OK  
PackageFile: ELMER_2.24.1.tgz
PackageFileSize: 39.23 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf ELMER.buildbin-libdir && mkdir ELMER.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ELMER_2.24.1.tar.gz /Library/Frameworks/R.framework/Resources/bin/R ELMER.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=ELMER.buildbin-libdir ELMER_2.24.1.tar.gz'
>>>>>>> 

* installing *source* package ‘ELMER’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Note: possible error in 'GDCquery(project = paste0("TCGA-", ': unused argument (legacy = TRUE) 
Note: possible error in 'GDCquery(project = paste0("TCGA-", ': unused arguments (file.type = "normalized_results", legacy = TRUE) 
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ELMER)