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This page was generated on 2023-10-16 11:36:02 -0400 (Mon, 16 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.2 LTS)x86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4626
palomino3Windows Server 2022 Datacenterx644.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" 4379
merida1macOS 12.6.4 Montereyx86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4395
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 420/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
consensusSeekeR 1.28.0  (landing page)
Astrid Deschenes
Snapshot Date: 2023-10-15 14:00:13 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/consensusSeekeR
git_branch: RELEASE_3_17
git_last_commit: e96278e
git_last_commit_date: 2023-04-25 10:42:44 -0400 (Tue, 25 Apr 2023)
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson2macOS 12.6.1 Monterey / arm64see weekly results here

BUILD results for consensusSeekeR on palomino3


To the developers/maintainers of the consensusSeekeR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/consensusSeekeR.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: consensusSeekeR
Version: 1.28.0
Command: chmod a+r consensusSeekeR -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data consensusSeekeR
StartedAt: 2023-10-15 18:21:06 -0400 (Sun, 15 Oct 2023)
EndedAt: 2023-10-15 18:22:48 -0400 (Sun, 15 Oct 2023)
EllapsedTime: 102.0 seconds
RetCode: 0
Status:   OK  
PackageFile: consensusSeekeR_1.28.0.tar.gz
PackageFileSize: 738.3 KiB

Command output

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###
### Running command:
###
###   chmod a+r consensusSeekeR -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data consensusSeekeR
###
##############################################################################
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* checking for file 'consensusSeekeR/DESCRIPTION' ... OK
* preparing 'consensusSeekeR':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a 'data/datalist' file should be added
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    'consensusSeekeR/data/A549_CTCF_MYJ_NarrowPeaks_partial.RData'
    'consensusSeekeR/data/A549_CTCF_MYJ_Peaks_partial.RData'
    'consensusSeekeR/data/A549_CTCF_MYN_NarrowPeaks_partial.RData'
    'consensusSeekeR/data/A549_CTCF_MYN_Peaks_partial.RData'
    'consensusSeekeR/data/A549_FOSL2_01_NarrowPeaks_partial.RData'
    'consensusSeekeR/data/A549_FOSL2_01_Peaks_partial.RData'
    'consensusSeekeR/data/A549_FOXA1_01_NarrowPeaks_partial.RData'
    'consensusSeekeR/data/A549_FOXA1_01_Peaks_partial.RData'
    'consensusSeekeR/data/A549_NR3C1_CFQ_NarrowPeaks_partial.RData'
    'consensusSeekeR/data/A549_NR3C1_CFQ_Peaks_partial.RData'
    'consensusSeekeR/data/A549_NR3C1_CFR_NarrowPeaks_partial.RData'
    'consensusSeekeR/data/A549_NR3C1_CFR_Peaks_partial.RData'
    'consensusSeekeR/data/A549_NR3C1_CFS_NarrowPeaks_partial.RData'
    'consensusSeekeR/data/A549_NR3C1_CFS_Peaks_partial.RData'
    'consensusSeekeR/data/NOrMAL_nucleosome_positions.RData'
    'consensusSeekeR/data/NOrMAL_nucleosome_ranges.RData'
    'consensusSeekeR/data/NucPosSimulator_nucleosome_positions.RData'
    'consensusSeekeR/data/NucPosSimulator_nucleosome_ranges.RData'
    'consensusSeekeR/data/PING_nucleosome_positions.RData'
    'consensusSeekeR/data/PING_nucleosome_ranges.RData'
* building 'consensusSeekeR_1.28.0.tar.gz'