Back to Multiple platform build/check report for BioC 3.17: simplified long |
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This page was generated on 2023-10-16 11:35:13 -0400 (Mon, 16 Oct 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4626 |
palomino3 | Windows Server 2022 Datacenter | x64 | 4.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" | 4379 |
merida1 | macOS 12.6.4 Monterey | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4395 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 209/2230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
biomvRCNS 1.40.0 (landing page) Yang Du
| nebbiolo1 | Linux (Ubuntu 22.04.2 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||||
palomino3 | Windows Server 2022 Datacenter / x64 | ERROR | ERROR | skipped | skipped | |||||||||
merida1 | macOS 12.6.4 Monterey / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
kjohnson2 | macOS 12.6.1 Monterey / arm64 | see weekly results here | ||||||||||||
To the developers/maintainers of the biomvRCNS package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/biomvRCNS.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: biomvRCNS |
Version: 1.40.0 |
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL biomvRCNS |
StartedAt: 2023-10-15 15:30:05 -0400 (Sun, 15 Oct 2023) |
EndedAt: 2023-10-15 15:30:06 -0400 (Sun, 15 Oct 2023) |
EllapsedTime: 1.2 seconds |
RetCode: 1 |
Status: ERROR |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL biomvRCNS ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/site-library’ * installing *source* package ‘biomvRCNS’ ... ** using staged installation ** libs using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’ gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c biomvRCNS.c -o biomvRCNS.o biomvRCNS.c: In function ‘forward’: biomvRCNS.c:153:43: error: ‘DOUBLE_XMIN’ undeclared (first use in this function); did you mean ‘DBL_MIN’? 153 | m_e(F, t, j, T)+= DOUBLE_XMIN; | ^~~~~~~~~~~ | DBL_MIN biomvRCNS.c:153:43: note: each undeclared identifier is reported only once for each function it appears in biomvRCNS.c: In function ‘viterbi’: biomvRCNS.c:294:36: error: ‘DOUBLE_XMAX’ undeclared (first use in this function); did you mean ‘DBL_MAX’? 294 | double obs, prod, maxprod=-DOUBLE_XMAX; | ^~~~~~~~~~~ | DBL_MAX biomvRCNS.c: In function ‘logviterbi’: biomvRCNS.c:401:36: error: ‘DOUBLE_XMAX’ undeclared (first use in this function); did you mean ‘DBL_MAX’? 401 | double obs, prod, maxprod=-DOUBLE_XMAX; | ^~~~~~~~~~~ | DBL_MAX make: *** [/home/biocbuild/bbs-3.17-bioc/R/etc/Makeconf:191: biomvRCNS.o] Error 1 ERROR: compilation failed for package ‘biomvRCNS’ * removing ‘/home/biocbuild/bbs-3.17-bioc/R/site-library/biomvRCNS’