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This page was generated on 2022-10-25 11:02:19 -0400 (Tue, 25 Oct 2022).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 12.6 Montereyarm644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4226
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for annmap on kjohnson


To the developers/maintainers of the annmap package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 54/2168HostnameOS / ArchINSTALLBUILDBUILD BIN
annmap 1.39.0  (landing page)
Chris Wirth
Snapshot Date: 2022-10-21 15:58:51 -0400 (Fri, 21 Oct 2022)
git_url: https://git.bioconductor.org/packages/annmap
git_branch: master
git_last_commit: 013522f
git_last_commit_date: 2022-04-26 11:11:12 -0400 (Tue, 26 Apr 2022)
kjohnsonmacOS 12.6 Monterey / arm64  OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: annmap
Version: 1.39.0
Command: rm -rf annmap.buildbin-libdir && mkdir annmap.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh annmap_1.39.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R annmap.buildbin-libdir
StartedAt: 2022-10-23 18:38:01 -0400 (Sun, 23 Oct 2022)
EndedAt: 2022-10-23 18:38:59 -0400 (Sun, 23 Oct 2022)
EllapsedTime: 57.7 seconds
RetCode: 0
Status:   OK  
PackageFile: annmap_1.39.0.tgz
PackageFileSize: 1.284 MiB

Command output

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###
### Running command:
###
###   rm -rf annmap.buildbin-libdir && mkdir annmap.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh annmap_1.39.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R annmap.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=annmap.buildbin-libdir annmap_1.39.0.tar.gz'
>>>>>>> 

* installing *source* package ‘annmap’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
in method for ‘probesetInRange’ with signature ‘x="RangedData"’: no definition for class “RangedData”
in method for ‘probeInRange’ with signature ‘x="RangedData"’: no definition for class “RangedData”
in method for ‘proteinInRange’ with signature ‘x="RangedData"’: no definition for class “RangedData”
in method for ‘domainInRange’ with signature ‘x="RangedData"’: no definition for class “RangedData”
in method for ‘geneInRange’ with signature ‘x="RangedData"’: no definition for class “RangedData”
in method for ‘transcriptInRange’ with signature ‘x="RangedData"’: no definition for class “RangedData”
in method for ‘exonInRange’ with signature ‘x="RangedData"’: no definition for class “RangedData”
in method for ‘estGeneInRange’ with signature ‘x="RangedData"’: no definition for class “RangedData”
in method for ‘estTranscriptInRange’ with signature ‘x="RangedData"’: no definition for class “RangedData”
in method for ‘estExonInRange’ with signature ‘x="RangedData"’: no definition for class “RangedData”
in method for ‘predictionTranscriptInRange’ with signature ‘x="RangedData"’: no definition for class “RangedData”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (annmap)