Back to Mac ARM64 build report for BioC 3.16
ABCDEFGH[I]JKLMNOPQRSTUVWXYZ

This page was generated on 2023-04-19 11:01:55 -0400 (Wed, 19 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 13.0 Venturaarm644.2.2 (2022-10-31) -- "Innocent and Trusting" 4256
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for InterMineR on kjohnson


To the developers/maintainers of the InterMineR package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 986/2183HostnameOS / ArchINSTALLBUILDBUILD BIN
InterMineR 1.20.0  (landing page)
InterMine Team
Snapshot Date: 2023-04-12 13:00:02 -0400 (Wed, 12 Apr 2023)
git_url: https://git.bioconductor.org/packages/InterMineR
git_branch: RELEASE_3_16
git_last_commit: 054eb84
git_last_commit_date: 2022-11-01 11:16:17 -0400 (Tue, 01 Nov 2022)
kjohnsonmacOS 13.0 Ventura / arm64  OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: InterMineR
Version: 1.20.0
Command: rm -rf InterMineR.buildbin-libdir && mkdir InterMineR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh InterMineR_1.20.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R InterMineR.buildbin-libdir
StartedAt: 2023-04-18 16:38:31 -0400 (Tue, 18 Apr 2023)
EndedAt: 2023-04-18 16:39:36 -0400 (Tue, 18 Apr 2023)
EllapsedTime: 64.8 seconds
RetCode: 0
Status:   OK  
PackageFile: InterMineR_1.20.0.tgz
PackageFileSize: 746.5 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf InterMineR.buildbin-libdir && mkdir InterMineR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh InterMineR_1.20.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R InterMineR.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=InterMineR.buildbin-libdir InterMineR_1.20.0.tar.gz'
>>>>>>> 

* installing *source* package ‘InterMineR’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘intersect’ in package ‘InterMineR’
Creating a new generic function for ‘union’ in package ‘InterMineR’
Creating a new generic function for ‘subtract’ in package ‘InterMineR’
** help
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:41: unexpected section header '\arguments'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:42: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:50: unexpected section header '\arguments'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:51: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:59: unexpected section header '\arguments'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:60: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:63: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:66: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:69: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:72: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:80: unexpected section header '\arguments'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:81: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:84: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:87: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:90: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:98: unexpected section header '\arguments'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:99: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:102: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:105: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:108: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:116: unexpected section header '\arguments'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:117: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:120: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:123: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:126: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:134: unexpected section header '\arguments'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:135: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:138: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:141: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:144: unknown macro '\item'
Warning: /private/tmp/RtmpNyVZGv/R.INSTALL5f194394b750/InterMineR/man/ListManager-methods.Rd:147: unknown macro '\item'
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: multiple methods tables found for ‘union’
Warning: multiple methods tables found for ‘subtract’
Warning: multiple methods tables found for ‘intersect’
** testing if installed package can be loaded from final location
Warning: multiple methods tables found for ‘union’
Warning: multiple methods tables found for ‘subtract’
Warning: multiple methods tables found for ‘intersect’
** testing if installed package keeps a record of temporary installation path
* DONE (InterMineR)