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This page was generated on 2022-07-11 11:06:44 -0400 (Mon, 11 Jul 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4148
lconwaymacOS 12.2.1 Montereyx86_644.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" 4168
kjohnsonmacOS 12.4 Montereyarm644.2.1 (2022-06-23) -- "Funny-Looking Kid" 3545
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INSTALL results for DelayedArray on kjohnson


To the developers/maintainers of the DelayedArray package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DelayedArray.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 492/2130HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DelayedArray 0.23.0  (landing page)
Hervé Pagès
Snapshot Date: 2022-07-10 14:00:02 -0400 (Sun, 10 Jul 2022)
git_url: https://git.bioconductor.org/packages/DelayedArray
git_branch: master
git_last_commit: 57f10a8
git_last_commit_date: 2022-04-26 11:37:51 -0400 (Tue, 26 Apr 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
lconwaymacOS 12.2.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnsonmacOS 12.4 Monterey / arm64  OK    NA    NA    NA  

Summary

Package: DelayedArray
Version: 0.23.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL DelayedArray
StartedAt: 2022-07-10 16:05:32 -0400 (Sun, 10 Jul 2022)
EndedAt: 2022-07-10 16:06:47 -0400 (Sun, 10 Jul 2022)
EllapsedTime: 75.7 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL DelayedArray
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library’
* installing *source* package ‘DelayedArray’ ...
** using staged installation
** libs
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/S4Vectors/include' -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c R_init_DelayedArray.c -o R_init_DelayedArray.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/S4Vectors/include' -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c S4Vectors_stubs.c -o S4Vectors_stubs.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/S4Vectors/include' -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c abind.c -o abind.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/S4Vectors/include' -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c array_selection.c -o array_selection.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/S4Vectors/include' -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c compress_atomic_vector.c -o compress_atomic_vector.o
compress_atomic_vector.c:66:9: warning: variable 'ans' is uninitialized when used here [-Wuninitialized]
        return ans;
               ^~~
compress_atomic_vector.c:64:10: note: initialize the variable 'ans' to silence this warning
        SEXP ans;
                ^
                 = NULL
compress_atomic_vector.c:73:9: warning: variable 'ans' is uninitialized when used here [-Wuninitialized]
        return ans;
               ^~~
compress_atomic_vector.c:71:10: note: initialize the variable 'ans' to silence this warning
        SEXP ans;
                ^
                 = NULL
compress_atomic_vector.c:85:9: warning: variable 'ans' is uninitialized when used here [-Wuninitialized]
        return ans;
               ^~~
compress_atomic_vector.c:83:10: note: initialize the variable 'ans' to silence this warning
        SEXP ans;
                ^
                 = NULL
compress_atomic_vector.c:92:9: warning: variable 'ans' is uninitialized when used here [-Wuninitialized]
        return ans;
               ^~~
compress_atomic_vector.c:90:10: note: initialize the variable 'ans' to silence this warning
        SEXP ans;
                ^
                 = NULL
4 warnings generated.
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/S4Vectors/include' -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c sparseMatrix_utils.c -o sparseMatrix_utils.o
clang -arch arm64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o DelayedArray.so R_init_DelayedArray.o S4Vectors_stubs.o abind.o array_selection.o compress_atomic_vector.o sparseMatrix_utils.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/00LOCK-DelayedArray/00new/DelayedArray/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘rowsum’ in package ‘DelayedArray’
Creating a new generic function for ‘aperm’ in package ‘DelayedArray’
Creating a new generic function for ‘apply’ in package ‘DelayedArray’
Creating a new generic function for ‘sweep’ in package ‘DelayedArray’
Creating a new generic function for ‘scale’ in package ‘DelayedArray’
Creating a generic function for ‘dnorm’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘pnorm’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qnorm’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘dbinom’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘pbinom’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qbinom’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘dpois’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘ppois’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qpois’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘dlogis’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘plogis’ from package ‘stats’ in package ‘DelayedArray’
Creating a generic function for ‘qlogis’ from package ‘stats’ in package ‘DelayedArray’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (DelayedArray)