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This page was generated on 2022-07-07 11:10:53 -0400 (Thu, 07 Jul 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.2.0 Patched (2022-06-02 r82447) -- "Vigorous Calisthenics" 4343
palomino4Windows Server 2022 Datacenterx644.2.0 Patched (2022-06-02 r82447 ucrt) -- "Vigorous Calisthenics" 4148
lconwaymacOS 12.2.1 Montereyx86_644.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" 4160
kjohnsonmacOS 12.4 Montereyarm644.2.0 Patched (2022-06-09 r82473) -- "Vigorous Calisthenics" 3115
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for ChAMP on kjohnson


To the developers/maintainers of the ChAMP package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ChAMP.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 296/2124HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChAMP 2.27.0  (landing page)
Yuan Tian
Snapshot Date: 2022-07-06 14:00:06 -0400 (Wed, 06 Jul 2022)
git_url: https://git.bioconductor.org/packages/ChAMP
git_branch: master
git_last_commit: 761236a
git_last_commit_date: 2022-04-26 11:16:54 -0400 (Tue, 26 Apr 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.2.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnsonmacOS 12.4 Monterey / arm64  ERROR    ERROR  skippedskipped

Summary

Package: ChAMP
Version: 2.27.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ChAMP
StartedAt: 2022-07-06 19:16:08 -0400 (Wed, 06 Jul 2022)
EndedAt: 2022-07-06 19:16:09 -0400 (Wed, 06 Jul 2022)
EllapsedTime: 1.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ChAMP
###
##############################################################################
##############################################################################


* checking for file ‘ChAMP/DESCRIPTION’ ... OK
* preparing ‘ChAMP’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependencies ‘minfi’, ‘DMRcate’, ‘IlluminaHumanMethylationEPICmanifest’, ‘sva’, ‘IlluminaHumanMethylation450kmanifest’, ‘IlluminaHumanMethylationEPICanno.ilm10b4.hg19’, ‘DNAcopy’, ‘preprocessCore’, ‘impute’, ‘wateRmelon’, ‘goseq’, ‘missMethyl’, ‘bumphunter’ are not available for package ‘ChAMP’
* removing ‘/private/tmp/RtmpOSSrQz/Rinst674165d16ec2/ChAMP’
      -----------------------------------
ERROR: package installation failed