| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:08:49 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the synapter package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/synapter.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1924/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| synapter 2.19.0 (landing page) Laurent Gatto
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: synapter |
| Version: 2.19.0 |
| Command: chmod a+r synapter -R && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data synapter |
| StartedAt: 2022-03-17 18:10:40 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 18:11:54 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 74.3 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r synapter -R && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data synapter ### ############################################################################## ############################################################################## * checking for file 'synapter/DESCRIPTION' ... OK * preparing 'synapter': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'fragmentmatching.Rmd' using rmarkdown Quitting from lines 30-34 (fragmentmatching.Rmd) Error: processing vignette 'fragmentmatching.Rmd' failed with diagnostics: there is no package called 'synapterdata' --- failed re-building 'fragmentmatching.Rmd' --- re-building 'synapter.Rmd' using rmarkdown Quitting from lines 36-43 (synapter.Rmd) Error: processing vignette 'synapter.Rmd' failed with diagnostics: there is no package called 'synapterdata' --- failed re-building 'synapter.Rmd' --- re-building 'synapter2.Rmd' using rmarkdown Quitting from lines 29-33 (synapter2.Rmd) Error: processing vignette 'synapter2.Rmd' failed with diagnostics: there is no package called 'synapterdata' --- failed re-building 'synapter2.Rmd' SUMMARY: processing the following files failed: 'fragmentmatching.Rmd' 'synapter.Rmd' 'synapter2.Rmd' Error: Vignette re-building failed. Execution halted