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This page was generated on 2022-03-18 11:08:39 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for scRepertoire on riesling1


To the developers/maintainers of the scRepertoire package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/scRepertoire.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1751/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scRepertoire 1.5.0  (landing page)
Nick Borcherding
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/scRepertoire
git_branch: master
git_last_commit: 946c9b6
git_last_commit_date: 2021-10-26 13:04:48 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: scRepertoire
Version: 1.5.0
Command: rm -rf scRepertoire.buildbin-libdir && mkdir scRepertoire.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=scRepertoire.buildbin-libdir scRepertoire_1.5.0.tar.gz
StartedAt: 2022-03-17 21:38:22 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:40:19 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 116.8 seconds
RetCode: 0
Status:   OK  
PackageFile: scRepertoire_1.5.0.zip
PackageFileSize: 5.805 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf scRepertoire.buildbin-libdir && mkdir scRepertoire.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=scRepertoire.buildbin-libdir scRepertoire_1.5.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'scRepertoire' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'scRepertoire'
    finding HTML links ... done
    Startrac                                html  
    Startrac.run                            html  
    StartracDiversity                       html  
    StartracOut                             html  
    abundanceContig                         html  
    addVariable                             html  
    alluvialClonotypes                      html  
    calIndex                                html  
    clonalDiversity                         html  
    clonalHomeostasis                       html  
    clonalOverlap                           html  
    clonalOverlay                           html  
    clonalProportion                        html  
    clonesizeDistribution                   html  
    clusterTCR                              html  
    combineBCR                              html  
    combineExpression                       html  
    combineTCR                              html  
    compareClonotypes                       html  
    contig_list                             html  
    expression2List                         html  
    getCirclize                             html  
    getSig                                  html  
    highlightClonotypes                     html  
    initialize-StartracOut-method           html  
    initialize-methods                      html  
    lengthContig                            html  
    loginfo                                 html  
    mcol.entropy                            html  
    mrow.entropy                            html  
    occupiedscRepertoire                    html  
    pIndex                                  html  
    quantContig                             html  
    screp_example                           html  
    show-StartracOut-method                 html  
    show                                    html  
    stripBarcode                            html  
    subsetContig                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'scRepertoire' as scRepertoire_1.5.0.zip
* DONE (scRepertoire)