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This page was generated on 2022-03-18 11:08:27 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for recount3 on riesling1


To the developers/maintainers of the recount3 package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/recount3.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1574/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
recount3 1.5.0  (landing page)
Leonardo Collado-Torres
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/recount3
git_branch: master
git_last_commit: ad3cecb
git_last_commit_date: 2021-11-22 20:00:54 -0400 (Mon, 22 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    TIMEOUT    OK  

Summary

Package: recount3
Version: 1.5.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL recount3
StartedAt: 2022-03-17 16:05:29 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 16:06:53 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 84.4 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL recount3
###
##############################################################################
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'recount3' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'recount3'
    finding HTML links ... done
    annotation_ext                          html  
    annotation_options                      html  
    available_projects                      html  
    available_samples                       html  
    compute_read_counts                     html  
    compute_scale_factors                   html  
    create_hub                              html  
    create_rse                              html  
    create_rse_manual                       html  
    expand_sra_attributes                   html  
    file_retrieve                           html  
    is_paired_end                           html  
    locate_url                              html  
    locate_url_ann                          html  
    project_homes                           html  
    read_counts                             html  
    read_metadata                           html  
    recount3-package                        html  
    recount3_cache                          html  
    recount3_cache_files                    html  
    recount3_cache_rm                       html  
    transform_counts                        html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (recount3)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'conclus' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'diggit' is missing or broken
 done