Back to Multiple platform build/check report for BioC 3.15
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2022-03-18 11:07:59 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for methrix on riesling1


To the developers/maintainers of the methrix package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/methrix.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1120/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
methrix 1.9.0  (landing page)
Anand Mayakonda
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/methrix
git_branch: master
git_last_commit: 0475e22
git_last_commit_date: 2021-10-26 12:55:50 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: methrix
Version: 1.9.0
Command: rm -rf methrix.buildbin-libdir && mkdir methrix.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=methrix.buildbin-libdir methrix_1.9.0.tar.gz
StartedAt: 2022-03-17 21:20:19 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:21:44 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 85.3 seconds
RetCode: 0
Status:   OK  
PackageFile: methrix_1.9.0.zip
PackageFileSize: 3.169 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf methrix.buildbin-libdir && mkdir methrix.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=methrix.buildbin-libdir methrix_1.9.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'methrix' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'methrix'
    finding HTML links ... done
    combine_methrix                         html  
    convert_HDF5_methrix                    html  
    convert_methrix                         html  
    coverage_filter                         html  
    extract_CPGs                            html  
    get_matrix                              html  
    get_region_summary                      html  
    finding level-2 HTML links ... done

    get_stats                               html  
    load_HDF5_methrix                       html  
    mask_methrix                            html  
    methrix-class                           html  
    methrix2bsseq                           html  
    methrix_data                            html  
    methrix_pca                             html  
    methrix_report                          html  
    order_by_sd                             html  
    plot_coverage                           html  
    plot_density                            html  
    plot_pca                                html  
    plot_stats                              html  
    plot_violin                             html  
    read_bedgraphs                          html  
    region_filter                           html  
    remove_snps                             html  
    remove_uncovered                        html  
    save_HDF5_methrix                       html  
    subset_methrix                          html  
    write_bedgraphs                         html  
    write_bigwigs                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'methrix' as methrix_1.9.0.zip
* DONE (methrix)