Back to Multiple platform build/check report for BioC 3.15 |
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This page was generated on 2022-01-06 11:04:58 -0500 (Thu, 06 Jan 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2021-11-10 r81171) -- "Unsuffered Consequences" | 4310 |
riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4045 |
merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2021-11-01 r81125) -- "Unsuffered Consequences" | 4123 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the iteremoval package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/iteremoval.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 968/2072 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
iteremoval 1.15.1 (landing page) Jiacheng Chuan
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: iteremoval |
Version: 1.15.1 |
Command: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD check --install=check:iteremoval.install-out.txt --library=/home/biocbuild/bbs-3.15-bioc/R/library --no-vignettes --timings iteremoval_1.15.1.tar.gz |
StartedAt: 2022-01-05 19:53:07 -0500 (Wed, 05 Jan 2022) |
EndedAt: 2022-01-05 19:55:29 -0500 (Wed, 05 Jan 2022) |
EllapsedTime: 142.0 seconds |
RetCode: 0 |
Status: OK |
CheckDir: iteremoval.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD check --install=check:iteremoval.install-out.txt --library=/home/biocbuild/bbs-3.15-bioc/R/library --no-vignettes --timings iteremoval_1.15.1.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.15-bioc/meat/iteremoval.Rcheck’ * using R Under development (unstable) (2021-11-10 r81171) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘iteremoval/DESCRIPTION’ ... OK * this is package ‘iteremoval’ version ‘1.15.1’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘iteremoval’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: OK
iteremoval.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD INSTALL iteremoval ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.15-bioc/R/library’ * installing *source* package ‘iteremoval’ ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (iteremoval)
iteremoval.Rcheck/tests/testthat.Rout
R Under development (unstable) (2021-11-10 r81171) -- "Unsuffered Consequences" Copyright (C) 2021 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(iteremoval) Loading required package: ggplot2 > > test_check("iteremoval") Current offset: 1 Current offset: 0.5 Current offset: 2 Current offset: 0.5 Current offset: 2 Current offset: 1 Current offset: 0.5 Current offset: 1 Current offset: 2 ══ Skipped tests ═══════════════════════════════════════════════════════════════ • empty test (2) [ FAIL 0 | WARN 0 | SKIP 2 | PASS 15 ] > > proc.time() user system elapsed 9.208 0.428 9.621
iteremoval.Rcheck/iteremoval-Ex.timings
name | user | system | elapsed | |
feature_hist | 1.180 | 0.036 | 1.217 | |
feature_prevalence | 0.758 | 0.004 | 0.762 | |
feature_removal | 1.124 | 0.011 | 1.136 | |
feature_screen | 0.776 | 0.005 | 0.780 | |
funcOrExp | 0.001 | 0.000 | 0.000 | |
ggiteration_trace | 1.010 | 0.007 | 1.017 | |
score_combine_methods | 0.001 | 0.001 | 0.000 | |
score_standardization_methods | 0 | 0 | 0 | |
weight_methods | 0.000 | 0.000 | 0.001 | |