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This page was generated on 2022-03-18 11:07:48 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for infercnv on riesling1


To the developers/maintainers of the infercnv package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/infercnv.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 934/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
infercnv 1.11.2  (landing page)
Christophe Georgescu
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/infercnv
git_branch: master
git_last_commit: 8cf9302
git_last_commit_date: 2022-02-03 16:07:46 -0400 (Thu, 03 Feb 2022)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: infercnv
Version: 1.11.2
Command: rm -rf infercnv.buildbin-libdir && mkdir infercnv.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=infercnv.buildbin-libdir infercnv_1.11.2.tar.gz
StartedAt: 2022-03-17 21:15:38 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:17:05 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 87.0 seconds
RetCode: 0
Status:   OK  
PackageFile: infercnv_1.11.2.zip
PackageFileSize: 4.29 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf infercnv.buildbin-libdir && mkdir infercnv.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=infercnv.buildbin-libdir infercnv_1.11.2.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'infercnv' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'infercnv'
    finding HTML links ... done
    CreateInfercnvObject                    html  
    HMM_states                              html  
    MCMC_inferCNV-class                     html  
    add_to_seurat                           html  
    apply_median_filtering                  html  
    color.palette                           html  
    filterHighPNormals                      html  
    inferCNVBayesNet                        html  
    infercnv-class                          html  
    infercnv-package                        html  
    infercnv_annots_example                 html  
    infercnv_data_example                   html  
    infercnv_genes_example                  html  
    infercnv_object_example                 html  
    mcmc_obj                                html  
    plot_cnv                                html  
    plot_per_group                          html  
    run                                     html  
    sample_object                           html  
    validate_infercnv_obj                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'infercnv' as infercnv_1.11.2.zip
* DONE (infercnv)