Kieran O'Neill
| Snapshot Date: 2022-10-18 13:55:19 -0400 (Tue, 18 Oct 2022) |
| git_url: https://git.bioconductor.org/packages/contiBAIT |
| git_branch: RELEASE_3_15 |
| git_last_commit: c077022 |
| git_last_commit_date: 2022-04-26 11:29:22 -0400 (Tue, 26 Apr 2022) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-10-19 13:21:19 -0400 (Wed, 19 Oct 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4386 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" | 4138 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4205 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the contiBAIT package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/contiBAIT.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 404/2140 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| contiBAIT 1.24.0 (landing page) Kieran O'Neill
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: contiBAIT |
| Version: 1.24.0 |
| Command: rm -rf contiBAIT.buildbin-libdir && mkdir contiBAIT.buildbin-libdir && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=contiBAIT.buildbin-libdir contiBAIT_1.24.0.tar.gz |
| StartedAt: 2022-10-19 05:43:59 -0400 (Wed, 19 Oct 2022) |
| EndedAt: 2022-10-19 05:45:27 -0400 (Wed, 19 Oct 2022) |
| EllapsedTime: 88.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: contiBAIT_1.24.0.zip |
| PackageFileSize: 4.65 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf contiBAIT.buildbin-libdir && mkdir contiBAIT.buildbin-libdir && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=contiBAIT.buildbin-libdir contiBAIT_1.24.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'contiBAIT' ... ** using staged installation ** libs g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I'F:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.15-bioc/R/library/BH/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c buildLinkageGroups.cpp -o buildLinkageGroups.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I'F:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.15-bioc/R/library/BH/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c computeSim.cpp -o computeSim.o g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I'F:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.15-bioc/R/library/BH/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c orderContigsGreedy.cpp -o orderContigsGreedy.o g++ -std=gnu++11 -shared -s -static-libgcc -o contiBAIT.dll tmp.def buildLinkageGroups.o computeSim.o orderContigsGreedy.o -lm -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.15-bioc/meat/contiBAIT.buildbin-libdir/00LOCK-contiBAIT/00new/contiBAIT/libs/x64 ** R ** data ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'contiBAIT' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'contiBAIT' ** testing if installed package can be loaded from final location Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'contiBAIT' ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'contiBAIT' as contiBAIT_1.24.0.zip * DONE (contiBAIT)