Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-03-18 11:07:14 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for codelink on riesling1


To the developers/maintainers of the codelink package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/codelink.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 364/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
codelink 1.63.0  (landing page)
Diego Diez
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/codelink
git_branch: master
git_last_commit: 1117cc8
git_last_commit_date: 2021-10-26 11:49:04 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: codelink
Version: 1.63.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL codelink
StartedAt: 2022-03-17 15:51:25 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 15:52:44 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 78.6 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL codelink
###
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'codelink' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'codelink'
    finding HTML links ... done
    Codelink-class                          html  
    CodelinkSet-class                       html  
    finding level-2 HTML links ... done

    CodelinkSetUnique-class                 html  
    Nondocumented-objects                   html  
    SNR                                     html  
    arrayNew                                html  
    arraySize                               html  
    as.matrix.Codelink                      html  
    averageProbes                           html  
    bkgdCorrect                             html  
    codPlot                                 html  
    codelink.example                        html  
    codset                                  html  
    createWeights                           html  
    cutCV                                   html  
    decDetect                               html  
    dim.Codelink                            html  
    fc2Cond                                 html  
    imageCodelink                           html  
    logCodelink                             html  
    mergeArray                              html  
    na2false                                html  
    normalize                               html  
    plotCV                                  html  
    plotCorrelation                         html  
    plotDensities                           html  
    plotMA                                  html  
    printHead                               html  
    readCodelink                            html  
    readHeader                              html  
    readHeaderXLS                           html  
    reportCodelink                          html  
    selCV                                   html  
    writeCodelink                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (codelink)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'easyRNASeq' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'OTUbase' is missing or broken
 done