Peter Blattmann
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/SWATH2stats |
| git_branch: master |
| git_last_commit: 108936a |
| git_last_commit_date: 2021-10-26 12:23:18 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:08:49 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the SWATH2stats package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SWATH2stats.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1918/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SWATH2stats 1.25.0 (landing page) Peter Blattmann
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: SWATH2stats |
| Version: 1.25.0 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL SWATH2stats |
| StartedAt: 2022-03-17 15:46:31 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 15:47:40 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 69.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL SWATH2stats
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'SWATH2stats' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SWATH2stats'
finding HTML links ... done
JPP_update html
MSstats_data html
OpenSWATH_data html
Spyogenes html
Study_design html
add_genesymbol html
assess_decoy_rate html
assess_fdr_byrun html
assess_fdr_overall html
convert4MSstats html
convert4PECA html
convert4aLFQ html
convert4mapDIA html
convert4pythonscript html
convert_protein_ids html
count_analytes html
disaggregate html
filter_all_peptides html
filter_mscore html
filter_mscore_condition html
filter_mscore_fdr html
filter_mscore_freqobs html
filter_on_max_peptides html
filter_on_min_peptides html
filter_proteotypic_peptides html
import_data html
load_mart html
mscore4assayfdr html
mscore4pepfdr html
mscore4protfdr html
plot.fdr_cube html
plot.fdr_table html
plot_correlation_between_samples html
plot_variation html
plot_variation_vs_total html
reduce_OpenSWATH_output html
removeDecoyProteins html
rmDecoyProt html
sample_annotation html
transform_MSstats_OpenSWATH html
unifyProteinGroupLabels html
validate_columns html
write_matrix_peptides html
write_matrix_proteins html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SWATH2stats)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'TSCAN' is missing or broken
done