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This page was generated on 2022-03-18 11:08:13 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for OncoScore on riesling1


To the developers/maintainers of the OncoScore package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/OncoScore.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1341/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OncoScore 1.23.0  (landing page)
Luca De Sano
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/OncoScore
git_branch: master
git_last_commit: 1ef7acb
git_last_commit_date: 2021-10-26 12:26:29 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: OncoScore
Version: 1.23.0
Command: rm -rf OncoScore.buildbin-libdir && mkdir OncoScore.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=OncoScore.buildbin-libdir OncoScore_1.23.0.tar.gz
StartedAt: 2022-03-17 21:26:20 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:27:27 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 66.8 seconds
RetCode: 0
Status:   OK  
PackageFile: OncoScore_1.23.0.zip
PackageFileSize: 283.6 KiB

Command output

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###
### Running command:
###
###   rm -rf OncoScore.buildbin-libdir && mkdir OncoScore.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=OncoScore.buildbin-libdir OncoScore_1.23.0.tar.gz
###
##############################################################################
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* installing *source* package 'OncoScore' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'OncoScore'
    finding HTML links ... done
    combine.query.results                   html  
    combine.single.matrix                   html  
    compute.frequencies.scores              html  
    compute.oncoscore                       html  
    compute.oncoscore.from.region           html  
    compute.oncoscore.timeseries            html  
    estimate.oncogenes                      html  
    genes                                   html  
    get.genes.from.biomart                  html  
    get.list.from.xml                       html  
    get.pubmed.driver.analysis              html  
    perform.query                           html  
    perform.query.from.region               html  
    perform.query.timeseries                html  
    plot.oncoscore                          html  
    plot.oncoscore.timeseries               html  
    query                                   html  
    query.timepoints                        html  
    timepoints                              html  
    try.scan                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'OncoScore' as OncoScore_1.23.0.zip
* DONE (OncoScore)