Andrew McDavid
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/MAST |
| git_branch: master |
| git_last_commit: 1843019 |
| git_last_commit_date: 2021-12-17 10:41:45 -0400 (Fri, 17 Dec 2021) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:07:56 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the MAST package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MAST.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1059/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MAST 1.21.3 (landing page) Andrew McDavid
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: MAST |
| Version: 1.21.3 |
| Command: rm -rf MAST.buildbin-libdir && mkdir MAST.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=MAST.buildbin-libdir MAST_1.21.3.tar.gz |
| StartedAt: 2022-03-17 21:18:59 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 21:20:09 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 69.5 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: MAST_1.21.3.zip |
| PackageFileSize: 6.159 MiB |
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### Running command:
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### rm -rf MAST.buildbin-libdir && mkdir MAST.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=MAST.buildbin-libdir MAST_1.21.3.tar.gz
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* installing *source* package 'MAST' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'MAST'
finding HTML links ... done
BayesGLMlike-class html
CovFromBoots html
Drop html
FromFlatDF html
FromMatrix html
GLMlike-class html
GSEATests-class html
Hypothesis html
LMERlike-class html
LMlike-class html
LRT html
MAST-defunct html
finding level-2 HTML links ... done
MAST-package html
SceToSingleCellAssay html
ZlmFit-class html
applyFlat html
bootVcov1 html
calcZ html
colData-set-SingleCellAssay-DataFrame-method
html
collectResiduals html
computeEtFromCt html
convertMASTClassicToSingleCellAssay html
defaultAssay html
defaultPrior html
dof html
ebayes html
expavg html
filterLowExpressedGenes html
fit html
freq html
getConcordance html
getwellKey html
gseaAfterBoot html
hushWarning html
impute html
influence.bayesglm html
invlogit html
logFC html
logmean html
lrTest-ZlmFit-character-method html
lrTest html
maits-dataset html
mast_filter html
meld_list_left html
melt.SingleCellAssay html
model.matrix-set html
model.matrix html
myBiplot html
plot.thresholdSCRNACountMatrix html
plotSCAConcordance html
plotlrt html
predict.ZlmFit html
predicted_sig-dataset html
primerAverage html
print.summaryZlmFit html
read.fluidigm html
removeResponse html
rstandard.bayesglm html
se.coef html
show html
split-SingleCellAssay-character-method
html
stat_ell html
subset-SingleCellAssay-method html
summarize html
summary-GSEATests-method html
summary-ZlmFit-method html
summary.thresholdSCRNACountMatrix html
thresholdSCRNACountMatrix html
vbeta-dataset html
vbetaFA-dataset html
waldTest-ZlmFit-matrix-method html
waldTest html
xform html
zlm html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'MAST' as MAST_1.21.3.zip
* DONE (MAST)