Zuguang Gu
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/HilbertCurve |
| git_branch: master |
| git_last_commit: e664964 |
| git_last_commit_date: 2021-11-20 04:10:01 -0400 (Sat, 20 Nov 2021) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:07:45 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the HilbertCurve package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HilbertCurve.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 874/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| HilbertCurve 1.25.1 (landing page) Zuguang Gu
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: HilbertCurve |
| Version: 1.25.1 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:HilbertCurve.install-out.txt --library=D:\biocbuild\bbs-3.15-bioc\R\library --no-vignettes --timings HilbertCurve_1.25.1.tar.gz |
| StartedAt: 2022-03-17 19:19:09 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 19:21:20 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 130.8 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: HilbertCurve.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:HilbertCurve.install-out.txt --library=D:\biocbuild\bbs-3.15-bioc\R\library --no-vignettes --timings HilbertCurve_1.25.1.tar.gz
###
##############################################################################
##############################################################################
* using log directory 'D:/biocbuild/bbs-3.15-bioc/meat/HilbertCurve.Rcheck'
* using R Under development (unstable) (2021-11-21 r81221)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'HilbertCurve/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'HilbertCurve' version '1.25.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'HilbertCurve' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
hc_layer-HilbertCurve-method 7.79 0.57 8.36
GenomicHilbertCurve 6.29 0.10 7.04
hc_layer-GenomicHilbertCurve-method 5.75 0.31 6.07
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
Running 'test-all.R'
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: OK
HilbertCurve.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL HilbertCurve
###
##############################################################################
##############################################################################
* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'HilbertCurve' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'HilbertCurve'
finding HTML links ... done
GenomicHilbertCurve-class html
GenomicHilbertCurve html
HilbertCurve-class html
HilbertCurve html
default_overlay html
hc_centered_text-HilbertCurve-method html
hc_layer-GenomicHilbertCurve-method html
hc_layer-HilbertCurve-method html
hc_layer-dispatch html
hc_level-HilbertCurve-method html
hc_map-GenomicHilbertCurve-method html
hc_normal_points-HilbertCurve-method html
hc_offset-HilbertCurve-method html
hc_png-HilbertCurve-method html
hc_points-GenomicHilbertCurve-method html
hc_points-HilbertCurve-method html
hc_points-dispatch html
hc_polygon-GenomicHilbertCurve-method html
hc_polygon-HilbertCurve-method html
hc_polygon-dispatch html
hc_rect-GenomicHilbertCurve-method html
hc_rect-HilbertCurve-method html
hc_rect-dispatch html
hc_segmented_points-HilbertCurve-method
html
hc_segments-GenomicHilbertCurve-method
html
hc_segments-HilbertCurve-method html
hc_segments-dispatch html
hc_text-GenomicHilbertCurve-method html
hc_text-HilbertCurve-method html
hc_text-dispatch html
is_white html
show-HilbertCurve-method html
unzoom-HilbertCurve-method html
zoom-HilbertCurve-method html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (HilbertCurve)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'rScudo' is missing or broken
done
HilbertCurve.Rcheck/tests/test-all.Rout
R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences"
Copyright (C) 2021 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> suppressWarnings(suppressPackageStartupMessages(library(HilbertCurve)))
>
> test_check("HilbertCurve")
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 8 ]
>
> proc.time()
user system elapsed
3.31 0.32 3.64
HilbertCurve.Rcheck/HilbertCurve-Ex.timings
| name | user | system | elapsed | |
| GenomicHilbertCurve-class | 0 | 0 | 0 | |
| GenomicHilbertCurve | 6.29 | 0.10 | 7.04 | |
| HilbertCurve-class | 0 | 0 | 0 | |
| HilbertCurve | 0.40 | 0.05 | 0.45 | |
| default_overlay | 0 | 0 | 0 | |
| hc_centered_text-HilbertCurve-method | 0.08 | 0.00 | 0.08 | |
| hc_layer-GenomicHilbertCurve-method | 5.75 | 0.31 | 6.07 | |
| hc_layer-HilbertCurve-method | 7.79 | 0.57 | 8.36 | |
| hc_layer-dispatch | 0 | 0 | 0 | |
| hc_level-HilbertCurve-method | 0.02 | 0.01 | 0.03 | |
| hc_map-GenomicHilbertCurve-method | 3.50 | 0.06 | 3.56 | |
| hc_normal_points-HilbertCurve-method | 0 | 0 | 0 | |
| hc_offset-HilbertCurve-method | 0.02 | 0.00 | 0.02 | |
| hc_png-HilbertCurve-method | 3.15 | 0.29 | 3.44 | |
| hc_points-GenomicHilbertCurve-method | 0.28 | 0.03 | 0.31 | |
| hc_points-HilbertCurve-method | 0.49 | 0.03 | 0.52 | |
| hc_points-dispatch | 0 | 0 | 0 | |
| hc_polygon-GenomicHilbertCurve-method | 0.33 | 0.03 | 0.35 | |
| hc_polygon-HilbertCurve-method | 0.11 | 0.02 | 0.13 | |
| hc_polygon-dispatch | 0 | 0 | 0 | |
| hc_rect-GenomicHilbertCurve-method | 0.32 | 0.01 | 0.34 | |
| hc_rect-HilbertCurve-method | 0.08 | 0.00 | 0.08 | |
| hc_rect-dispatch | 0 | 0 | 0 | |
| hc_segmented_points-HilbertCurve-method | 0 | 0 | 0 | |
| hc_segments-GenomicHilbertCurve-method | 0.35 | 0.03 | 0.38 | |
| hc_segments-HilbertCurve-method | 0.06 | 0.02 | 0.08 | |
| hc_segments-dispatch | 0 | 0 | 0 | |
| hc_text-GenomicHilbertCurve-method | 0.27 | 0.01 | 0.28 | |
| hc_text-HilbertCurve-method | 0.11 | 0.00 | 0.11 | |
| hc_text-dispatch | 0 | 0 | 0 | |
| is_white | 0 | 0 | 0 | |
| show-HilbertCurve-method | 0 | 0 | 0 | |
| unzoom-HilbertCurve-method | 0.01 | 0.00 | 0.02 | |
| zoom-HilbertCurve-method | 0.02 | 0.00 | 0.01 | |