Jason Ross
| Snapshot Date: 2022-10-18 13:55:19 -0400 (Tue, 18 Oct 2022) |
| git_url: https://git.bioconductor.org/packages/Harman |
| git_branch: RELEASE_3_15 |
| git_last_commit: ce6b2ab |
| git_last_commit_date: 2022-04-26 11:32:01 -0400 (Tue, 26 Apr 2022) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-10-19 13:21:37 -0400 (Wed, 19 Oct 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4386 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" | 4138 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4205 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the Harman package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Harman.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 876/2140 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Harman 1.24.0 (landing page) Jason Ross
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: Harman |
| Version: 1.24.0 |
| Command: rm -rf Harman.buildbin-libdir && mkdir Harman.buildbin-libdir && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=Harman.buildbin-libdir Harman_1.24.0.tar.gz |
| StartedAt: 2022-10-19 06:00:18 -0400 (Wed, 19 Oct 2022) |
| EndedAt: 2022-10-19 06:00:41 -0400 (Wed, 19 Oct 2022) |
| EllapsedTime: 22.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: Harman_1.24.0.zip |
| PackageFileSize: 1.186 MiB |
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### Running command:
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### rm -rf Harman.buildbin-libdir && mkdir Harman.buildbin-libdir && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=Harman.buildbin-libdir Harman_1.24.0.tar.gz
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* installing *source* package 'Harman' ...
** using staged installation
** libs
g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -D_ARRAYALIGNEMT=4 -D_USE_RCPP=1 -I'F:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -I"F:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include" -std=c++0x -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Harman.cpp -o Harman.o
Harman.cpp: In function 'SEXPREC* HarmanMain(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
Harman.cpp:3008:3: warning: this 'else' clause does not guard... [-Wmisleading-indentation]
3008 | else
| ^~~~
Harman.cpp:3022:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else'
3022 | std::vector<unsigned int> tr_std_tmp = Rcpp::as<std::vector<unsigned int> >(tr) ;
| ^~~
In file included from Harman.cpp:182:
CSelectRandom.h: In instantiation of 'std::vector<unsigned int>* CSelectRandom<T>::ReturnVectOf32bitIntegersInRange_CSTDLIB(size_t, size_t, size_t, size_t) [with T = double; size_t = long long unsigned int]':
Harman.cpp:1764:117: required from here
CSelectRandom.h:943:20: warning: comparison of integer expressions of different signedness: 'long long int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
943 | while (currval < howManyIN)
| ~~~~~~~~^~~~~~~~~~~
g++ -std=gnu++11 -shared -s -static-libgcc -o Harman.dll tmp.def Harman.o -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.15-bioc/meat/Harman.buildbin-libdir/00LOCK-Harman/00new/Harman/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'Harman' as Harman_1.24.0.zip
* DONE (Harman)