Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-03-18 11:07:29 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for ExperimentSubset on riesling1


To the developers/maintainers of the ExperimentSubset package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ExperimentSubset.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 620/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ExperimentSubset 1.5.0  (landing page)
Irzam Sarfraz
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/ExperimentSubset
git_branch: master
git_last_commit: ce90b14
git_last_commit_date: 2021-10-26 13:03:55 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ExperimentSubset
Version: 1.5.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ExperimentSubset
StartedAt: 2022-03-17 16:01:30 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 16:02:38 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 68.0 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ExperimentSubset
###
##############################################################################
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'ExperimentSubset' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetSummarizedExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetRangedSummarizedExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetSingleCellExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetTreeSummarizedExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetSpatialExperiment", slots in prototype and not in class: listData, elementType
** help
*** installing help indices
  converting help for package 'ExperimentSubset'
    finding HTML links ... done
    AssaySubset-class                       html  
    AssaySubset                             html  
    ExperimentSubset                        html  
    SubsetRangedSummarizedExperiment-class
                                            html  
    SubsetSingleCellExperiment-class        html  
    SubsetSpatialExperiment-class           html  
    SubsetSummarizedExperiment-class        html  
    SubsetTreeSummarizedExperiment-class    html  
    createSubset                            html  
    getSubsetAssay                          html  
    reducedDimNames-set                     html  
    reducedDimNames                         html  
    reducedDims-set-ANY-method              html  
    reducedDims-set                         html  
    setSubsetAssay                          html  
    subsetAssayCount                        html  
    subsetAssayNames                        html  
    subsetColData                           html  
    subsetColLinks                          html  
    subsetColnames                          html  
    subsetCount                             html  
    subsetDim                               html  
    subsetNames                             html  
    subsetParent                            html  
    subsetRowData                           html  
    subsetRowLinks                          html  
    subsetRownames                          html  
    subsetSpatialCoords                     html  
    subsetSpatialData                       html  
    subsetSummary                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ExperimentSubset)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'enrichplot' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'rtracklayer' is missing or broken
 done