| Back to Multiple platform build/check report for BioC 3.15 |
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This page was generated on 2022-03-18 11:07:09 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the Cepo package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Cepo.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 277/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Cepo 1.1.1 (landing page) Hani Jieun Kim
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: Cepo |
| Version: 1.1.1 |
| Command: chmod a+r Cepo -R && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Cepo |
| StartedAt: 2022-03-17 16:33:02 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 16:33:36 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 34.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### chmod a+r Cepo -R && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Cepo
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* checking for file 'Cepo/DESCRIPTION' ... OK
* preparing 'Cepo':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'cepo.Rmd' using rmarkdown
Error: processing vignette 'cepo.Rmd' failed with diagnostics:
Duplicate chunk label 'return-p-values', which has been used for the chunk:
ds_res_pvalues = Cepo(exprsMat = logcounts(cellbench),
cellType = cellbench$celltype,
computePvalue = 200,
prefilter_pzero = 0.4)
Error: tangling vignette 'cepo.Rmd' failed with diagnostics:
Duplicate chunk label 'return-p-values', which has been used for the chunk:
ds_res_pvalues = Cepo(exprsMat = logcounts(cellbench),
cellType = cellbench$celltype,
computePvalue = 200,
prefilter_pzero = 0.4)
--- failed re-building 'cepo.Rmd'
SUMMARY: processing the following files failed:
'cepo.Rmd' 'cepo.Rmd'
Error: Vignette re-building failed.
Execution halted