| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:33 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the wateRmelon package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/wateRmelon.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 2059/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| wateRmelon 2.0.0 (landing page) Leo C Schalkwyk
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: wateRmelon |
| Version: 2.0.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/wateRmelon_2.0.0.tar.gz && rm -rf wateRmelon.buildbin-libdir && mkdir wateRmelon.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=wateRmelon.buildbin-libdir wateRmelon_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL wateRmelon_2.0.0.zip && rm wateRmelon_2.0.0.tar.gz wateRmelon_2.0.0.zip |
| StartedAt: 2022-04-12 07:13:51 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:16:11 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 139.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/wateRmelon_2.0.0.tar.gz && rm -rf wateRmelon.buildbin-libdir && mkdir wateRmelon.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=wateRmelon.buildbin-libdir wateRmelon_2.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL wateRmelon_2.0.0.zip && rm wateRmelon_2.0.0.tar.gz wateRmelon_2.0.0.zip
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2 3026k 2 86187 0 0 258k 0 0:00:11 --:--:-- 0:00:11 258k
35 3026k 35 1062k 0 0 790k 0 0:00:03 0:00:01 0:00:02 790k
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100 3026k 100 3026k 0 0 1290k 0 0:00:02 0:00:02 --:--:-- 1290k
install for i386
* installing *source* package 'wateRmelon' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
Creating a generic function from function 'as.methylumi' in package 'wateRmelon'
Creating a generic function from function 'adjustedDasen' in package 'wateRmelon'
** help
*** installing help indices
converting help for package 'wateRmelon'
finding HTML links ... done
BMIQ html
Beta2M html
adaptRefQuantiles html
adjustedDasen html
adjustedFunnorm html
agep html
as.methylumi-methods html
beadc html
beadcount html
bscon html
colnames-methods html
combo html
dasen-MethyLumiSet html
dasen-MethySet html
dasen-exprmethy450 html
dasen html
db1 html
dmrse-methods html
dmrse html
dot-getManifestString html
estimateCellCounts.wmln html
estimateSex html
genki-methods html
genki html
genkme html
got html
iDMR html
melon html
metrics html
outlyx-methods html
outlyx html
pfilter html
pwod-methods html
pwod html
qual html
readEPIC html
seabi-methods html
seabi html
seabird html
sextest html
wateRmelon-package html
wm_internal html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
** testing if installed package can be loaded from final location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'wateRmelon' ...
** testing if installed package can be loaded
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
* MD5 sums
packaged installation of 'wateRmelon' as wateRmelon_2.0.0.zip
* DONE (wateRmelon)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'wateRmelon' successfully unpacked and MD5 sums checked