Guangchuang Yu
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/treeio |
| git_branch: RELEASE_3_14 |
| git_last_commit: a06b6b3 |
| git_last_commit_date: 2021-11-12 01:50:22 -0400 (Fri, 12 Nov 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:30 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the treeio package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/treeio.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1995/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| treeio 1.18.1 (landing page) Guangchuang Yu
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: treeio |
| Version: 1.18.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/treeio_1.18.1.tar.gz && rm -rf treeio.buildbin-libdir && mkdir treeio.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=treeio.buildbin-libdir treeio_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL treeio_1.18.1.zip && rm treeio_1.18.1.tar.gz treeio_1.18.1.zip |
| StartedAt: 2022-04-12 06:18:33 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:19:58 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 84.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/treeio_1.18.1.tar.gz && rm -rf treeio.buildbin-libdir && mkdir treeio.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=treeio.buildbin-libdir treeio_1.18.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL treeio_1.18.1.zip && rm treeio_1.18.1.tar.gz treeio_1.18.1.zip
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install for i386
* installing *source* package 'treeio' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'treeio'
finding HTML links ... done
Nnode.treedata html
as.treedata html
as.ultrametric html
beast-parser html
drop.tip-methods html
get-placements html
get.tree html
get.treetext-methods html
getNodeNum html
is.ggtree html
isTip html
jplace-class html
label_branch_paml html
mask html
merge_tree html
print.treedataList html
raxml2nwk html
read-jtree html
read.astral html
read.codeml html
read.codeml_mlc html
read.fasta html
read.hyphy html
read.hyphy.seq html
read.iqtree html
read.jplace html
read.mcmctree html
read.mega_tabular html
read.newick html
read.nhx html
read.paml_rst html
read.phylip html
read.phylip.seq html
read.phylip.tree html
read.phyloxml html
read.r8s html
read.raxml html
read.treeqza html
reexports html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/treeio.buildbin-libdir/00LOCK-treeio/00new/treeio/help/as.treedata.html
rename_taxa html
rescale_tree html
root-method html
tree_subset html
write-jtree html
write.beast html
write.beast.newick html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'treeio' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'treeio' as treeio_1.18.1.zip
* DONE (treeio)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'treeio' successfully unpacked and MD5 sums checked