Lucy McNeill
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/synapsis |
| git_branch: RELEASE_3_14 |
| git_last_commit: 1728ef1 |
| git_last_commit_date: 2021-10-26 13:13:40 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:27 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the synapsis package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/synapsis.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1918/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| synapsis 1.0.0 (landing page) Lucy McNeill
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: synapsis |
| Version: 1.0.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/synapsis_1.0.0.tar.gz && rm -rf synapsis.buildbin-libdir && mkdir synapsis.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=synapsis.buildbin-libdir synapsis_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL synapsis_1.0.0.zip && rm synapsis_1.0.0.tar.gz synapsis_1.0.0.zip |
| StartedAt: 2022-04-12 04:23:14 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 04:24:24 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 70.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/synapsis_1.0.0.tar.gz && rm -rf synapsis.buildbin-libdir && mkdir synapsis.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=synapsis.buildbin-libdir synapsis_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL synapsis_1.0.0.zip && rm synapsis_1.0.0.tar.gz synapsis_1.0.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
61 1254k 61 776k 0 0 942k 0 0:00:01 --:--:-- 0:00:01 943k
100 1254k 100 1254k 0 0 1119k 0 0:00:01 0:00:01 --:--:-- 1119k
install for i386
* installing *source* package 'synapsis' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'synapsis'
finding HTML links ... done
annotate_foci_counting html
annotate_foci_counting_adjusted html
append_data_frame html
auto_crop_fast html
count_foci html
crop_single_object_fast html
get_C1 html
get_blobs html
get_coincident_foci html
get_foci_per_cell html
get_overlap_mask html
get_pachytene html
keep_cells html
make_foci_mask html
make_strand_mask html
remove_XY html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'synapsis' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'synapsis' as synapsis_1.0.0.zip
* DONE (synapsis)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'synapsis' successfully unpacked and MD5 sums checked