Evarist Planet
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/phenoTest |
| git_branch: RELEASE_3_14 |
| git_last_commit: 28925db |
| git_last_commit_date: 2021-10-26 11:57:57 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:05 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the phenoTest package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/phenoTest.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1408/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| phenoTest 1.42.0 (landing page) Evarist Planet
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: phenoTest |
| Version: 1.42.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/phenoTest_1.42.0.tar.gz && rm -rf phenoTest.buildbin-libdir && mkdir phenoTest.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=phenoTest.buildbin-libdir phenoTest_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL phenoTest_1.42.0.zip && rm phenoTest_1.42.0.tar.gz phenoTest_1.42.0.zip |
| StartedAt: 2022-04-12 07:21:46 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:23:18 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 91.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/phenoTest_1.42.0.tar.gz && rm -rf phenoTest.buildbin-libdir && mkdir phenoTest.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=phenoTest.buildbin-libdir phenoTest_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL phenoTest_1.42.0.zip && rm phenoTest_1.42.0.tar.gz phenoTest_1.42.0.zip
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install for i386
* installing *source* package 'phenoTest' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'phenoTest'
finding HTML links ... done
ClusterPhenoTest html
ExpressionPhenoTest html
barplotSignatures-methods html
barplotSignifSignatures-methods html
epheno-class html
finding level-2 HTML links ... done
epheno html
epheno2html html
ephenoGetters html
eset html
eset.genelevel html
eset2genelevel html
export2CSV-methods html
export2CSV html
findCopyNumber html
genesInArea html
getEsPositions html
getGseaSignatures html
getVars2test-methods html
getVars2test html
gsea html
gsea.subset html
gsea2html html
gseaData-class html
gseaSignatures-class html
gseaSignatures-methods html
gseaSignatures html
gseaSignaturesSign-class html
gseaSignaturesVar-class html
gseaSignificance html
gseaSignificanceSign-class html
gseaSignificanceVar-class html
heatmapPhenoTest-methods html
heatmapPhenoTest html
pAdjust-methods html
pAdjust html
pca html
phenoTest-package html
plot.gsea html
plot.gseaSignatures html
plots4epheno html
show-methods html
smoothCoxph html
summary.gsea html
summary.gseaSignificance html
write.html html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'phenoTest' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'phenoTest' as phenoTest_1.42.0.zip
* DONE (phenoTest)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'phenoTest' successfully unpacked and MD5 sums checked