| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:20 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the circRNAprofiler package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/circRNAprofiler.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 321/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| circRNAprofiler 1.8.0 (landing page) Simona Aufiero
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: circRNAprofiler |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/circRNAprofiler_1.8.0.tar.gz && rm -rf circRNAprofiler.buildbin-libdir && mkdir circRNAprofiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=circRNAprofiler.buildbin-libdir circRNAprofiler_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL circRNAprofiler_1.8.0.zip && rm circRNAprofiler_1.8.0.tar.gz circRNAprofiler_1.8.0.zip |
| StartedAt: 2022-04-12 06:45:47 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:48:23 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 155.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/circRNAprofiler_1.8.0.tar.gz && rm -rf circRNAprofiler.buildbin-libdir && mkdir circRNAprofiler.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=circRNAprofiler.buildbin-libdir circRNAprofiler_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL circRNAprofiler_1.8.0.zip && rm circRNAprofiler_1.8.0.tar.gz circRNAprofiler_1.8.0.zip
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
4 3616k 4 171k 0 0 453k 0 0:00:07 --:--:-- 0:00:07 452k
36 3616k 36 1330k 0 0 963k 0 0:00:03 0:00:01 0:00:02 963k
93 3616k 93 3398k 0 0 1427k 0 0:00:02 0:00:02 --:--:-- 1427k
100 3616k 100 3616k 0 0 1472k 0 0:00:02 0:00:02 --:--:-- 1472k
install for i386
* installing *source* package 'circRNAprofiler' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'circRNAprofiler'
finding HTML links ... done
ahChainFiles html
ahRepeatMasker html
annotateBSJs html
annotateRepeats html
finding level-2 HTML links ... done
annotateSNPsGWAS html
attractSpecies html
backSplicedJunctions html
checkProjectFolder html
filterCirc html
formatGTF html
getBackSplicedJunctions html
getCircSeqs html
getDeseqRes html
getDetectionTools html
getEdgerRes html
getMiRsites html
getMotifs html
getRandomBSJunctions html
getRegexPattern html
getSeqsAcrossBSJs html
getSeqsFromGRs html
gtf html
gwasTraits html
importCircExplorer2 html
importCircMarker html
importKnife html
importMapSplice html
importNCLscan html
importOther html
importUroborus html
initCircRNAprofiler html
iupac html
liftBSJcoords html
memeDB html
mergeBSJunctions html
mergeMotifs html
mergedBSJunctions html
miRspeciesCodes html
plotExBetweenBSEs html
plotExPosition html
plotHostGenes html
plotLenBSEs html
plotLenIntrons html
plotMiR html
plotMotifs html
plotTotExons html
rearrangeMiRres html
volcanoPlot html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'circRNAprofiler' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'circRNAprofiler' as circRNAprofiler_1.8.0.zip
* DONE (circRNAprofiler)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'circRNAprofiler' successfully unpacked and MD5 sums checked