| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:26 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the SummarizedBenchmark package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SummarizedBenchmark.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1900/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SummarizedBenchmark 2.12.0 (landing page) Patrick Kimes
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: SummarizedBenchmark |
| Version: 2.12.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SummarizedBenchmark_2.12.0.tar.gz && rm -rf SummarizedBenchmark.buildbin-libdir && mkdir SummarizedBenchmark.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SummarizedBenchmark.buildbin-libdir SummarizedBenchmark_2.12.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SummarizedBenchmark_2.12.0.zip && rm SummarizedBenchmark_2.12.0.tar.gz SummarizedBenchmark_2.12.0.zip |
| StartedAt: 2022-04-12 06:34:38 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:37:28 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 169.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SummarizedBenchmark_2.12.0.tar.gz && rm -rf SummarizedBenchmark.buildbin-libdir && mkdir SummarizedBenchmark.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SummarizedBenchmark.buildbin-libdir SummarizedBenchmark_2.12.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SummarizedBenchmark_2.12.0.zip && rm SummarizedBenchmark_2.12.0.tar.gz SummarizedBenchmark_2.12.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
18 5645k 18 1051k 0 0 1087k 0 0:00:05 --:--:-- 0:00:05 1087k
54 5645k 54 3059k 0 0 1558k 0 0:00:03 0:00:01 0:00:02 1558k
100 5645k 100 5645k 0 0 1979k 0 0:00:02 0:00:02 --:--:-- 1980k
install for i386
* installing *source* package 'SummarizedBenchmark' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SummarizedBenchmark'
finding HTML links ... done
BDData-class html
BDData-setter html
BDData-show html
BDData html
BDMethod-class html
BDMethod-setter html
BDMethod-show html
BDMethod html
BDMethodList-class html
BDMethodList-setter html
BDMethodList-show html
BDMethodList html
BenchDesign-class html
BenchDesign-show html
BenchDesign html
SummarizedBenchmark-class html
finding level-2 HTML links ... done
SummarizedBenchmark html
addMethod html
addPerformanceMetric html
allSB html
assayNames-setter html
availableMetrics html
buildBench html
compareBDData html
compareBDMethod html
compareBenchDesigns html
dropMethod html
estimateMetrics html
expandMethod html
groundTruths-setter html
groundTruths html
hashBDData html
mcols-setter html
modifyMethod html
modmethod html
performanceMetrics-setter html
performanceMetrics html
plotMethodsOverlap html
plotROC html
printMethod html
sb html
tdat html
tidyBDMethod html
tidyUpMetrics html
updateBench html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SummarizedBenchmark' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SummarizedBenchmark' as SummarizedBenchmark_2.12.0.zip
* DONE (SummarizedBenchmark)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SummarizedBenchmark' successfully unpacked and MD5 sums checked